Package: PLNet
Type: Package
Title: PLNet: Estimating graphical models for count data with
        applications to single-cell gene network
Version: 1.5
Date: 2021-11-12
Author: Feiyi Xiao, Junjie Tang
Maintainer: Junjie Tang <junjie.tang@pku.edu.cn>
Description: PLNet is a R package for calculating the precision matrix of Poisson log-normal model using the maximum marginal log-likelihood estimator (MMLE) and the D-trace loss. We first estimate the covariance matrix by MMLE and then infer the precision matrix by D-trace loss using the modified function from R package EQUAL.
License: GPL
Imports: Rcpp (>= 1.0.7),MASS, CVXR
LinkingTo: Rcpp, RcppArmadillo, MASS, CVXR, orthopolynom
biocViews: SingleCell, Transcription, Gene Regulatory Network
        Inference, Software
BugReports: 
URL:
Depends: R (>= 2.10)
LazyData: true
NeedsCompilation: yes
Packaged: 2022-05-26 08:31:49 UTC; TJJ
