This folder contains all the code and dataset we used in this work.

pfc-7 data is in data folder. 

Run simulation_run.py file for simulation result, which return save 
Manifold Degradation Curve syntetic.png and output3d_plot.png 

Run  run_on_pfc7.py file then will save pfc7_result folder across 8 sessions, each session on a 4090 GPU will take approximately 60 mins

The 0512main_save_umap_lesion.py file is to further save more results and save in the pfc7_result folder

The posthoc_analysis_0513.py, 0513_posthoc_additional.py and Bayesian_Anova_20250515.py are further analysis and results are saved in folder ctis_master_results_0512

This code is implemented on NVIDIA RTX 4090 GPU using Ripser, UMAP, SHAP library. 

 
