@article{douthit2015exposing,
  title={Exposing some important barriers to health care access in the rural USA},
  author={Douthit, Nathan and Kiv, Sakal and Dwolatzky, Tzvi and Biswas, Seema},
  journal={Public health},
  volume={129},
  number={6},
  pages={611--620},
  year={2015},
  publisher={Elsevier}
}

@misc{googlemed,
  key={Google},
  title={{Google} Medical Imaging Suite},
  howpublished={\url{https://cloud.google.com/medical-imaging}},
  note={Accessed: 2025-01-27}
}

@misc{amazonhealthimaging,
  key={Amazon},
  title={AWS {HealthImaging}},
  howpublished={\url{https://aws.amazon.com/healthimaging/}},
  note={Accessed: 2025-01-27}
}

@misc{taubmanhtj2k,
  title={High Throughput {JPEG} 2000 ({HTJ}2{K}) and the {JPH} file format: a primer},
  author={Taubman, David and Naman, Aous and Mathew, Reji and Smith, Michael and Watanabe, Osamu and Lemieux, Pierre-Anthony},
  year={2020},
  howpublished={\url{https://ds.jpeg.org/whitepapers/jpeg-htj2k-whitepaper.pdf}}
}

@misc{hafeyhtj2k,
  title={{HTJ}2{K} Transfer Syntax Support},
  author={Hafey, Chris and Wallace, Bill},
  year={2022},
  howpublished={\url{https://www.dicomstandard.org/docs/librariesprovider2/default-document-library/htj2k-transfer-syntax-support.docx}}
}

@article{taubman2019high,
  title={High throughput {JPEG} 2000 ({HTJ}2{K}): Algorithm, performance and potential},
  author={Taubman, David and Naman, Aous and Mathew, Reji and Smith, Michael and Watanabe, O},
  journal={International Telecommunications Union (ITU)},
  pages={15444--15},
  year={2019}
}

@article{goldberger2000physiobank,
  title={PhysioBank, PhysioToolkit, and PhysioNet: components of a new research resource for complex physiologic signals},
  author={Goldberger, Ary L and Amaral, Luis AN and Glass, Leon and Hausdorff, Jeffrey M and Ivanov, Plamen Ch and Mark, Roger G and Mietus, Joseph E and Moody, George B and Peng, Chung-Kang and Stanley, H Eugene},
  journal={circulation},
  volume={101},
  number={23},
  pages={e215--e220},
  year={2000},
  publisher={Am Heart Assoc}
}

@article{johnson2019mimic,
  title={MIMIC-CXR, a de-identified publicly available database of chest radiographs with free-text reports},
  author={Johnson, Alistair EW and Pollard, Tom J and Berkowitz, Seth J and Greenbaum, Nathaniel R and Lungren, Matthew P and Deng, Chih-ying and Mark, Roger G and Horng, Steven},
  journal={Scientific data},
  volume={6},
  number={1},
  pages={317},
  year={2019},
  publisher={Nature Publishing Group UK London}
}

@article{johnson2019mimicjpg,
  title={MIMIC-CXR-JPG, a large publicly available database of labeled chest radiographs},
  author={Johnson, Alistair EW and Pollard, Tom J and Greenbaum, Nathaniel R and Lungren, Matthew P and Deng, Chih-ying and Peng, Yifan and Lu, Zhiyong and Mark, Roger G and Berkowitz, Seth J and Horng, Steven},
  journal={arXiv preprint arXiv:1901.07042},
  year={2019}
}

@inproceedings{foos2000jpeg,
  title={JPEG 2000 compression of medical imagery},
  author={Foos, David H and Muka, Edward and Slone, Richard M and Erickson, Bradley J and Flynn, Michael J and Clunie, David A and Hildebrand, Lloyd and Kohm, Kevin S and Young, Susan S},
  booktitle={Medical Imaging 2000: PACS Design and Evaluation: Engineering and Clinical Issues},
  volume={3980},
  pages={85--96},
  year={2000},
  organization={SPIE}
}

@article{saffor2001comparative,
  title={A comparative study of image compression between JPEG and wavelet},
  author={Saffor, Amhamed and Ramli, Abdul Rahman and Ng, Kwan-Hoong},
  journal={Malaysian Journal of computer science},
  volume={14},
  number={1},
  pages={39--45},
  year={2001}
}

@article{koff2006overview,
  title={An overview of digital compression of medical images: can we use lossy image compression in radiology?},
  author={Koff, David A and Shulman, Harry},
  journal={Journal-Canadian Association of Radiologists},
  volume={57},
  number={4},
  pages={211},
  year={2006},
  publisher={Citeseer}
}

@article{sabottke2020effect,
  title={The effect of image resolution on deep learning in radiography},
  author={Sabottke, Carl F and Spieler, Bradley M},
  journal={Radiology: Artificial Intelligence},
  volume={2},
  number={1},
  pages={e190015},
  year={2020},
  publisher={Radiological Society of North America}
}

@article{clark2013cancer,
  title={The Cancer Imaging Archive (TCIA): maintaining and operating a public information repository},
  author={Clark, Kenneth and Vendt, Bruce and Smith, Kirk and Freymann, John and Kirby, Justin and Koppel, Paul and Moore, Stephen and Phillips, Stanley and Maffitt, David and Pringle, Michael and others},
  journal={Journal of digital imaging},
  volume={26},
  pages={1045--1057},
  year={2013},
  publisher={Springer}
}

@misc{tcia,
author = {Eary, Janet F.},
title = {The Cancer Imaging Archive (TCIA)},
howpublished = {\url{https://deainfo.nci.nih.gov/advisory/fac/0222/Eary.pdf}},
year = {2022},
note = {(Accessed on 06/26/2023)}
}

@article{bentaleb2018survey,
  title={A survey on bitrate adaptation schemes for streaming media over HTTP},
  author={Bentaleb, Abdelhak and Taani, Bayan and Begen, Ali C and Timmerer, Christian and Zimmermann, Roger},
  journal={IEEE Communications Surveys \& Tutorials},
  volume={21},
  number={1},
  pages={562--585},
  year={2018},
  publisher={IEEE}
}

@article{munteanu1998wavelet,
  title={Wavelet lossy and lossless image compression techniques--use of the lifting scheme},
  author={Munteanu, Adrian and Cornelis, Jan and Cristea, Paul},
  journal={Articles Digital Signal Processing Laboratory},
  year={1998}
}

@misc{openjph,
author = {Naman, Aous},
title = {OpenJPH: Open source implementation of High-throughput JPEG2000 (HTJ2K)},
url = {https://github.com/aous72/OpenJPH}
}

@misc{jpeg2000,
title = {JPEG 2000 Image Coding System},
author = {Boliek, Martin and Christopoulos, Charilaos and Majani, Eric},
url = {https://www.ics.uci.edu/\textasciitilde dan/class/267/papers/jpeg2000.pdf},
year={2000},
}

@article{wang2004image,
  title={Image quality assessment: from error visibility to structural similarity},
  author={Wang, Zhou and Bovik, Alan C and Sheikh, Hamid R and Simoncelli, Eero P},
  journal={IEEE transactions on image processing},
  volume={13},
  number={4},
  pages={600--612},
  year={2004},
  publisher={IEEE}
}

@misc{openjphpy,
author = {Kulkarni, Pranav},
license = {BSD-2-Clause},
title = {{openjphpy}},
url = {https://github.com/UM2ii/openjphpy}
}

@article{hosny2018artificial,
  title={Artificial intelligence in radiology},
  author={Hosny, Ahmed and Parmar, Chintan and Quackenbush, John and Schwartz, Lawrence H and Aerts, Hugo JWL},
  journal={Nature Reviews Cancer},
  volume={18},
  number={8},
  pages={500--510},
  year={2018},
  publisher={Nature Publishing Group}
}

@article{thrall2018artificial,
  title={Artificial intelligence and machine learning in radiology: opportunities, challenges, pitfalls, and criteria for success},
  author={Thrall, James H and Li, Xiang and Li, Quanzheng and Cruz, Cinthia and Do, Synho and Dreyer, Keith and Brink, James},
  journal={Journal of the American College of Radiology},
  volume={15},
  number={3},
  pages={504--508},
  year={2018},
  publisher={Elsevier}
}

@article{doo2024economic,
  title={Economic and environmental costs of cloud technologies for medical imaging and radiology artificial intelligence},
  author={Doo, Florence X and Kulkarni, Pranav and Siegel, Eliot L and Toland, Michael and Yi, Paul H and Carlos, Ruth C and Parekh, Vishwa S},
  journal={Journal of the American College of Radiology},
  volume={21},
  number={2},
  pages={248--256},
  year={2024},
  publisher={Elsevier},
}

@article{kiryati2021dataset,
  title={Dataset growth in medical image analysis research},
  author={Kiryati, Nahum and Landau, Yuval},
  journal={Journal of imaging},
  volume={7},
  number={8},
  pages={155},
  year={2021},
  publisher={MDPI}
}

@article{magudia2021trials,
  title={The trials and tribulations of assembling large medical imaging datasets for machine learning applications},
  author={Magudia, Kirti and Bridge, Christopher P and Andriole, Katherine P and Rosenthal, Michael H},
  journal={Journal of digital imaging},
  volume={34},
  pages={1424--1429},
  year={2021},
  publisher={Springer}
}

@article{li2023systematic,
  title={A systematic collection of medical image datasets for deep learning},
  author={Li, Johann and Zhu, Guangming and Hua, Cong and Feng, Mingtao and Bennamoun, Basheer and Li, Ping and Lu, Xiaoyuan and Song, Juan and Shen, Peiyi and Xu, Xu and others},
  journal={ACM Computing Surveys},
  volume={56},
  number={5},
  pages={1--51},
  year={2023},
  publisher={ACM New York, NY}
}

@article{li2016first,
  title={The first step for neuroimaging data analysis: DICOM to NIfTI conversion},
  author={Li, Xiangrui and Morgan, Paul S and Ashburner, John and Smith, Jolinda and Rorden, Christopher},
  journal={Journal of neuroscience methods},
  volume={264},
  pages={47--56},
  year={2016},
  publisher={Elsevier}
}

@article{jia2023importance,
  title={The importance of resource awareness in artificial intelligence for healthcare},
  author={Jia, Zhenge and Chen, Jianxu and Xu, Xiaowei and Kheir, John and Hu, Jingtong and Xiao, Han and Peng, Sui and Hu, Xiaobo Sharon and Chen, Danny and Shi, Yiyu},
  journal={Nature Machine Intelligence},
  volume={5},
  number={7},
  pages={687--698},
  year={2023},
  publisher={Nature Publishing Group UK London}
}

@article{national2011reduced,
  title={Reduced lung-cancer mortality with low-dose computed tomographic screening},
  author={National Lung Screening Trial Research Team},
  journal={New England Journal of Medicine},
  volume={365},
  number={5},
  pages={395--409},
  year={2011},
  publisher={Mass Medical Soc}
}

@article{kulkarni2024isle,
  title={ISLE: An Intelligent Streaming Framework for High-Throughput AI Inference in Medical Imaging},
  author={Kulkarni, Pranav and Kanhere, Adway and Siegel, Eliot L and Yi, Paul H and Parekh, Vishwa S},
  journal={Journal of Imaging Informatics in Medicine},
  volume={37},
  number={6},
  pages={3250--3263},
  year={2024},
  publisher={Springer}
}

@inproceedings{wang2017chestx,
  title={Chestx-ray8: Hospital-scale chest x-ray database and benchmarks on weakly-supervised classification and localization of common thorax diseases},
  author={Wang, Xiaosong and Peng, Yifan and Lu, Le and Lu, Zhiyong and Bagheri, Mohammadhadi and Summers, Ronald M},
  booktitle={Proceedings of the IEEE conference on computer vision and pattern recognition},
  pages={2097--2106},
  year={2017}
}

@article{antonelli2022medical,
  title={The medical segmentation decathlon},
  author={Antonelli, Michela and Reinke, Annika and Bakas, Spyridon and Farahani, Keyvan and Kopp-Schneider, Annette and Landman, Bennett A and Litjens, Geert and Menze, Bjoern and Ronneberger, Olaf and Summers, Ronald M and others},
  journal={Nature communications},
  volume={13},
  number={1},
  pages={4128},
  year={2022},
  publisher={Nature Publishing Group UK London}
}

@article{armato2011lung,
  title={The lung image database consortium (LIDC) and image database resource initiative (IDRI): a completed reference database of lung nodules on CT scans},
  author={Armato III, Samuel G and McLennan, Geoffrey and Bidaut, Luc and McNitt-Gray, Michael F and Meyer, Charles R and Reeves, Anthony P and Zhao, Binsheng and Aberle, Denise R and Henschke, Claudia I and Hoffman, Eric A and others},
  journal={Medical physics},
  volume={38},
  number={2},
  pages={915--931},
  year={2011},
  publisher={Wiley Online Library}
}

@article{ji2022amos,
  title={Amos: A large-scale abdominal multi-organ benchmark for versatile medical image segmentation},
  author={Ji, Yuanfeng and Bai, Haotian and Ge, Chongjian and Yang, Jie and Zhu, Ye and Zhang, Ruimao and Li, Zhen and Zhanng, Lingyan and Ma, Wanling and Wan, Xiang and others},
  journal={Advances in neural information processing systems},
  volume={35},
  pages={36722--36732},
  year={2022}
}

@article{aerts2014decoding,
  title={Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach},
  author={Aerts, Hugo JWL and Velazquez, Emmanuel Rios and Leijenaar, Ralph TH and Parmar, Chintan and Grossmann, Patrick and Carvalho, Sara and Bussink, Johan and Monshouwer, Ren{\'e} and Haibe-Kains, Benjamin and Rietveld, Derek and others},
  journal={Nature communications},
  volume={5},
  number={1},
  pages={4006},
  year={2014},
  publisher={Nature Publishing Group UK London}
}

@article{shinagare2015radiogenomics,
  title={Radiogenomics of clear cell renal cell carcinoma: Preliminary findings of the cancer genome atlas--renal cell carcinoma (TCGA--RCC) imaging research group},
  author={Shinagare, Atul B and Vikram, Raghu and Jaffe, Carl and Akin, Oguz and Kirby, Justin and Huang, Erich and Freymann, John and Sainani, Nisha I and Sadow, Cheryl A and Bathala, Tharakeswara K and others},
  journal={Abdominal imaging},
  volume={40},
  pages={1684--1692},
  year={2015},
  publisher={Springer}
}

@article{guo2015prediction,
  title={Prediction of clinical phenotypes in invasive breast carcinomas from the integration of radiomics and genomics data},
  author={Guo, Wentian and Li, Hui and Zhu, Yitan and Lan, Li and Yang, Shengjie and Drukker, Karen and Morris, Elizabeth and Burnside, Elizabeth and Whitman, Gary and Giger, Maryellen L and others},
  journal={Journal of medical imaging},
  volume={2},
  number={4},
  pages={041007--041007},
  year={2015},
  publisher={Society of Photo-Optical Instrumentation Engineers}
}

@article{bakas2022university,
  title={The University of Pennsylvania glioblastoma (UPenn-GBM) cohort: advanced MRI, clinical, genomics, \& radiomics},
  author={Bakas, Spyridon and Sako, Chiharu and Akbari, Hamed and Bilello, Michel and Sotiras, Aristeidis and Shukla, Gaurav and Rudie, Jeffrey D and Santamar{\'\i}a, Natali Flores and Kazerooni, Anahita Fathi and Pati, Sarthak and others},
  journal={Scientific data},
  volume={9},
  number={1},
  pages={453},
  year={2022},
  publisher={Nature Publishing Group UK London}
}

@article{botnari2024considerations,
  title={Considerations on Image Preprocessing Techniques Required by Deep Learning Models. The Case of the Knee MRIs},
  author={Botnari, A and Kadar, M and Patrascu, JM},
  journal={M{\ae}dica},
  volume={19},
  number={3},
  pages={526},
  year={2024}
}

@article{galbusera2024image,
  title={Image annotation and curation in radiology: an overview for machine learning practitioners},
  author={Galbusera, Fabio and Cina, Andrea},
  journal={European Radiology Experimental},
  volume={8},
  number={1},
  pages={11},
  year={2024},
  publisher={Springer}
}

@article{jimenez2024copycats,
  title={Copycats: the many lives of a publicly available medical imaging dataset},
  author={Jim{\'e}nez-S{\'a}nchez, Amelia and Avlona, Natalia-Rozalia and Juodelyte, Dovile and Sourget, Th{\'e}o and Vang-Larsen, Caroline and Rogers, Anna and Zajac, Hubert Dariusz and Cheplygina, Veronika},
  journal={arXiv preprint arXiv:2402.06353},
  year={2024}
}

@article{fedorov2021nci,
  title={NCI imaging data commons},
  author={Fedorov, Andrey and Longabaugh, William JR and Pot, David and Clunie, David A and Pieper, Steve and Aerts, Hugo JWL and Homeyer, Andr{\'e} and Lewis, Rob and Akbarzadeh, Afshin and Bontempi, Dennis and others},
  journal={Cancer research},
  volume={81},
  number={16},
  pages={4188--4193},
  year={2021},
  publisher={AACR}
}

@article{koff2009pan,
  title={Pan-Canadian evaluation of irreversible compression ratios (“lossy” compression) for development of national guidelines},
  author={Koff, David and Bak, Peter and Brownrigg, Paul and Hosseinzadeh, Danoush and Khademi, April and Kiss, Alex and Lepanto, Luigi and Michalak, Tracy and Shulman, Harry and Volkening, Andrew},
  journal={Journal of digital imaging},
  volume={22},
  pages={569--578},
  year={2009},
  publisher={Springer}
}

@article{elhadad2024reduction,
  title={Reduction of NIFTI files storage and compression to facilitate telemedicine services based on quantization hiding of downsampling approach},
  author={Elhadad, Ahmed and Jamjoom, Mona and Abulkasim, Hussein},
  journal={Scientific Reports},
  volume={14},
  number={1},
  pages={5168},
  year={2024},
  publisher={Nature Publishing Group UK London}
}

@article{noumeir2011using,
  title={Using JPEG 2000 interactive protocol to stream a large image or a large image set},
  author={Noumeir, Rita and Pambrun, Jean-Fran{\c{c}}ois},
  journal={Journal of digital imaging},
  volume={24},
  pages={833--843},
  year={2011},
  publisher={Springer}
}

@inproceedings{landman2015miccai,
  title={Miccai multi-atlas labeling beyond the cranial vault--workshop and challenge},
  author={Landman, Bennett and Xu, Zhoubing and Igelsias, J and Styner, Martin and Langerak, T and Klein, Arno},
  booktitle={Proc. MICCAI Multi-Atlas Labeling Beyond Cranial Vault—Workshop Challenge},
  volume={5},
  pages={12},
  year={2015}
}

@article{bilic2023liver,
  title={The liver tumor segmentation benchmark (lits)},
  author={Bilic, Patrick and Christ, Patrick and Li, Hongwei Bran and Vorontsov, Eugene and Ben-Cohen, Avi and Kaissis, Georgios and Szeskin, Adi and Jacobs, Colin and Mamani, Gabriel Efrain Humpire and Chartrand, Gabriel and others},
  journal={Medical image analysis},
  volume={84},
  pages={102680},
  year={2023},
  publisher={Elsevier}
}