absl-py==2.1.0
anndata==0.10.9
annotated-types==0.7.0
annoy==1.17.3
antlr4-python3-runtime==4.9.3
array_api_compat==1.10.0
asttokens==3.0.0
astunparse==1.6.3
cebra==0.4.0
certifi==2024.12.14
charset-normalizer==3.4.1
click==8.1.8
cloudpickle==3.1.0
colorlog==6.9.0
comm==0.2.2
contourpy==1.3.0
contrastive-ne==0.3.8
cycler==0.12.1
debugpy==1.8.11
decorator==5.1.1
Deprecated==1.2.15
dm-tree==0.1.8
docker-pycreds==0.4.0
eval_type_backport==0.2.2
exceptiongroup==1.2.2
executing==2.1.0
fastrlock==0.8.3
filelock==3.16.1
fire==0.7.0
flatbuffers==24.12.23
fonttools==4.55.3
fsspec==2024.12.0
future==1.0.0
gast==0.6.0
get-annotations==0.1.2
gitdb==4.0.12
GitPython==3.1.44
google-pasta==0.2.0
graphtools==1.5.3
grpcio==1.69.0
h5py==3.12.1
hydra-colorlog==1.2.0
hydra-core==1.3.2
hydra-submitit-launcher==1.2.0
idna==3.10
imageio==2.37.0
importlib_metadata==8.5.0
importlib_resources==6.5.2
ipykernel==6.29.5
ipython==8.18.1
jedi==0.19.2
Jinja2==3.1.5
joblib==1.3.2
jupyter_client==8.6.3
jupyter_core==5.7.2
keopscore==2.2.3
keras==3.8.0
kiwisolver==1.4.7
kmedoids==0.5.3.1
lazy_loader==0.4
legacy-api-wrap==1.4.1
libclang==18.1.1
literate-dataclasses==0.0.6
llvmlite==0.43.0
lolP==0.0.4
Markdown==3.7
markdown-it-py==3.0.0
MarkupSafe==3.0.2
matplotlib==3.8.4
matplotlib-inline==0.1.7
mdurl==0.1.2
ml-dtypes==0.4.1
mpmath==1.3.0
namex==0.0.8
natsort==8.4.0
nest-asyncio==1.6.0
networkx==3.2.1
numba==0.60.0
numpy==1.26.4
nvidia-cublas-cu12==12.1.3.1
nvidia-cuda-cupti-cu12==12.1.105
nvidia-cuda-nvrtc-cu12==12.1.105
nvidia-cuda-runtime-cu12==12.1.105
nvidia-cudnn-cu12==8.9.2.26
nvidia-cufft-cu12==11.0.2.54
nvidia-curand-cu12==10.3.2.106
nvidia-cusolver-cu12==11.4.5.107
nvidia-cusparse-cu12==12.1.0.106
nvidia-nccl-cu12==2.19.3
nvidia-nvjitlink-cu12==12.6.85
nvidia-nvtx-cu12==12.1.105
omegaconf==2.3.0
opt_einsum==3.4.0
optree==0.13.1
packaging==24.2
pandas==2.0.3
parso==0.8.4
patsy==1.0.1
pexpect==4.9.0
phate==1.0.11
pillow==11.1.0
platformdirs==4.3.6
prompt_toolkit==3.0.48
protobuf==5.29.3
psutil==6.1.1
ptyprocess==0.7.0
pure_eval==0.2.3
pybind11==2.13.6
pydantic==2.10.4
pydantic_core==2.27.2
Pygments==2.19.1
PyGSP==0.5.1
pykeops==2.2.3
pynndescent==0.5.13
pyparsing==3.2.1
python-dateutil==2.9.0.post0
python-dotenv==1.0.1
pytz==2024.2
PyYAML==6.0.2
pyzmq==26.2.0
requests==2.32.3
rich==13.9.4
rootutils==1.0.7
s-gd2==1.8.1
scanpy==1.10.3
scikit-image==0.24.0
scikit-learn==1.4.2
scipy==1.10.1
scprep==1.2.3
seaborn==0.13.2
sentry-sdk==2.19.2
session-info==1.0.0
setproctitle==1.3.4
six==1.17.0
smmap==5.0.2
stack-data==0.6.3
statsmodels==0.14.4
stdlib-list==0.11.0
submitit==1.5.2
sympy==1.13.3
tasklogger==1.2.0
tensorboard==2.18.0
tensorboard-data-server==0.7.2
tensorflow==2.18.0
tensorflow-io-gcs-filesystem==0.37.1
termcolor==2.5.0
threadpoolctl==3.5.0
tifffile==2024.8.30
torch==2.2.2
torchvision==0.17.2
tornado==6.4.2
tqdm==4.67.1
traitlets==5.14.3
triton==2.2.0
typing_extensions==4.12.2
tzdata==2024.2
umap-learn==0.5.7
urllib3==2.3.0
wandb==0.19.2
wcwidth==0.2.13
Werkzeug==3.1.3
wrapt==1.17.0
xgboost-cpu==2.1.4
zipp==3.21.0
pacmap==0.8.0
