@inproceedings{yang2020longitudinal,
  title={Longitudinal image registration with temporal-order and subject-specificity discrimination},
  author={Yang, Qianye and Fu, Yunguan and Giganti, Francesco and Ghavami, Nooshin and Chen, Qingchao and Noble, J Alison and Vercauteren, Tom and Barratt, Dean and Hu, Yipeng},
  booktitle={Medical Image Computing and Computer Assisted Intervention--MICCAI 2020: 23rd International Conference, Lima, Peru, October 4--8, 2020, Proceedings, Part III 23},
  pages={243--252},
  year={2020},
  organization={Springer}
}

@article{Ants,
  title={A reproducible evaluation of ANTs similarity metric performance in brain image registration},
  author={Avants, Brian B and Tustison, Nicholas J and Song, Gang and Cook, Philip A and Klein, Arno and Gee, James C},
  journal={Neuroimage},
  volume={54},
  number={3},
  pages={2033--2044},
  year={2011},
  publisher={Elsevier}
}

@article{Niftyreg,
  title={Global image registration using a symmetric block-matching approach},
  author={Modat, Marc and Cash, David M and Daga, Pankaj and Winston, Gavin P and Duncan, John S and Ourselin, S{\'e}bastien},
  journal={Journal of medical imaging},
  volume={1},
  number={2},
  pages={024003--024003},
  year={2014},
  publisher={Society of Photo-Optical Instrumentation Engineers}
}

@inproceedings{Mattias,
  title={Revisiting iterative highly efficient optimisation schemes in medical image registration},
  author={Hansen, Lasse and Heinrich, Mattias P},
  booktitle={Medical Image Computing and Computer Assisted Intervention--MICCAI 2021: 24th International Conference, Strasbourg, France, September 27--October 1, 2021, Proceedings, Part IV 24},
  pages={203--212},
  year={2021},
  organization={Springer}
}

@article{Bob,
  title={A deep learning framework for unsupervised affine and deformable image registration},
  author={De Vos, Bob D and Berendsen, Floris F and Viergever, Max A and Sokooti, Hessam and Staring, Marius and I{\v{s}}gum, Ivana},
  journal={Medical image analysis},
  volume={52},
  pages={128--143},
  year={2019},
  publisher={Elsevier}
}

@article{Voxelmorph,
  title={Voxelmorph: a learning framework for deformable medical image registration},
  author={Balakrishnan, Guha and Zhao, Amy and Sabuncu, Mert R and Guttag, John and Dalca, Adrian V},
  journal={IEEE transactions on medical imaging},
  volume={38},
  number={8},
  pages={1788--1800},
  year={2019},
  publisher={IEEE}
}

@article{NCC,
  title={Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain},
  author={Avants, Brian B and Epstein, Charles L and Grossman, Murray and Gee, James C},
  journal={Medical image analysis},
  volume={12},
  number={1},
  pages={26--41},
  year={2008},
  publisher={Elsevier}
}


@inproceedings{wolterink2022implicit,
  title={Implicit neural representations for deformable image registration},
  author={Wolterink, Jelmer M and Zwienenberg, Jesse C and Brune, Christoph},
  booktitle={International Conference on Medical Imaging with Deep Learning},
  pages={1349--1359},
  year={2022},
  organization={PMLR}
}

@article{sitzmann2020implicit,
  title={Implicit neural representations with periodic activation functions},
  author={Sitzmann, Vincent and Martel, Julien and Bergman, Alexander and Lindell, David and Wetzstein, Gordon},
  journal={Advances in neural information processing systems},
  volume={33},
  pages={7462--7473},
  year={2020}
}
@inproceedings{simpson2011longitudinal,
  title={Longitudinal brain MRI analysis with uncertain registration},
  author={Simpson, Ivor JA and Woolrich, MarkW and Groves, Adrian R and Schnabel, Julia A},
  booktitle={Medical Image Computing and Computer-Assisted Intervention--MICCAI 2011: 14th International Conference, Toronto, Canada, September 18-22, 2011, Proceedings, Part II 14},
  pages={647--654},
  year={2011},
  organization={Springer}
}
@inproceedings{durrleman2009spatiotemporal,
  title={Spatiotemporal atlas estimation for developmental delay detection in longitudinal datasets},
  author={Durrleman, Stanley and Pennec, Xavier and Trouv{\'e}, Alain and Gerig, Guido and Ayache, Nicholas},
  booktitle={Medical Image Computing and Computer-Assisted Intervention--MICCAI 2009: 12th International Conference, London, UK, September 20-24, 2009, Proceedings, Part I 12},
  pages={297--304},
  year={2009},
  organization={Springer}
}
@article{csapo2013longitudinal,
  title={Longitudinal image registration with temporally-dependent image similarity measure},
  author={Csapo, Istvan and Davis, Brad and Shi, Yundi and Sanchez, Mar and Styner, Martin and Niethammer, Marc},
  journal={IEEE transactions on medical imaging},
  volume={32},
  number={10},
  pages={1939--1951},
  year={2013},
  publisher={IEEE}
}

@inproceedings{serag2012lisa,
  title={LISA: Longitudinal image registration via spatio-temporal atlases},
  author={Serag, Ahmed and Aljabar, Paul and Counsell, Serena and Boardman, James and Hajnal, Jo V and Rueckert, Daniel},
  booktitle={2012 9th IEEE International Symposium on Biomedical Imaging (ISBI)},
  pages={334--337},
  year={2012},
  organization={IEEE}
}
@article{petersen2010alzheimer,
  title={Alzheimer's disease Neuroimaging Initiative (ADNI) clinical characterization},
  author={Petersen, Ronald Carl and Aisen, Paul S and Beckett, Laurel A and Donohue, Michael C and Gamst, Anthony Collins and Harvey, Danielle J and Jack Jr, CR and Jagust, William J and Shaw, Leslie M and Toga, Arthur W and others},
  journal={Neurology},
  volume={74},
  number={3},
  pages={201--209},
  year={2010},
  publisher={AAN Enterprises}
}
@article{hu2017learning,
  title={Learning-based deformable image registration for infant MR images in the first year of life},
  author={Hu, Shunbo and Wei, Lifang and Gao, Yaozong and Guo, Yanrong and Wu, Guorong and Shen, Dinggang},
  journal={Medical physics},
  volume={44},
  number={1},
  pages={158--170},
  year={2017},
  publisher={Wiley Online Library}
}
@article{liao2012novel,
  title={A novel framework for longitudinal atlas construction with groupwise registration of subject image sequences},
  author={Liao, Shu and Jia, Hongjun and Wu, Guorong and Shen, Dinggang and Alzheimer's Disease Neuroimaging Initiative and others},
  journal={NeuroImage},
  volume={59},
  number={2},
  pages={1275--1289},
  year={2012},
  publisher={Elsevier}
}
@inproceedings{thottupattu2022method,
  title={A method for image registration via broken geodesics},
  author={Thottupattu, Alphin J and Sivaswamy, Jayanthi and Krishnan, Venkateswaran P},
  booktitle={International Workshop on Biomedical Image Registration},
  pages={47--56},
  year={2022},
  organization={Springer}
}
@article{qiu2008parallel,
  title={Parallel transport in diffeomorphisms distinguishes the time-dependent pattern of hippocampal surface deformation due to healthy aging and the dementia of the Alzheimer's type},
  author={Qiu, Anqi and Younes, Laurent and Miller, Michael I and Csernansky, John G},
  journal={NeuroImage},
  volume={40},
  number={1},
  pages={68--76},
  year={2008},
  publisher={Elsevier}
}
@inproceedings{fishbaugh2011estimation,
  title={Estimation of smooth growth trajectories with controlled acceleration from time series shape data},
  author={Fishbaugh, James and Durrleman, Stanley and Gerig, Guido},
  booktitle={Medical Image Computing and Computer-Assisted Intervention--MICCAI 2011: 14th International Conference, Toronto, Canada, September 18-22, 2011, Proceedings, Part II 14},
  pages={401--408},
  year={2011},
  organization={Springer}
}
@inproceedings{csapo2012longitudinal,
  title={Longitudinal image registration with non-uniform appearance change},
  author={Csapo, Istvan and Davis, Brad and Shi, Yundi and Sanchez, Mar and Styner, Martin and Niethammer, Marc},
  booktitle={Medical Image Computing and Computer-Assisted Intervention--MICCAI 2012: 15th International Conference, Nice, France, October 1-5, 2012, Proceedings, Part III 15},
  pages={280--288},
  year={2012},
  organization={Springer}
}
@article{guizard2015spatio,
  title={Spatio-Temporal regularization for longitudinal registration to subject-specific 3D template},
  author={Guizard, Nicolas and Fonov, Vladimir S and Garc{\'\i}a-Lorenzo, Daniel and Nakamura, Kunio and Aubert-Broche, B{\'e}reng{\`e}re and Collins, D Louis},
  journal={PloS one},
  volume={10},
  number={8},
  pages={e0133352},
  year={2015},
  publisher={Public Library of Science San Francisco, CA USA}
}
@inproceedings{genova2019learning,
  title={Learning shape templates with structured implicit functions},
  author={Genova, Kyle and Cole, Forrester and Vlasic, Daniel and Sarna, Aaron and Freeman, William T and Funkhouser, Thomas},
  booktitle={Proceedings of the IEEE/CVF International Conference on Computer Vision},
  pages={7154--7164},
  year={2019}
}
@article{gropp2020implicit,
  title={Implicit geometric regularization for learning shapes},
  author={Gropp, Amos and Yariv, Lior and Haim, Niv and Atzmon, Matan and Lipman, Yaron},
  journal={arXiv preprint arXiv:2002.10099},
  year={2020}
}
@article{sitzmann2019scene,
  title={Scene representation networks: Continuous 3d-structure-aware neural scene representations},
  author={Sitzmann, Vincent and Zollh{\"o}fer, Michael and Wetzstein, Gordon},
  journal={Advances in Neural Information Processing Systems},
  volume={32},
  year={2019}
}
@article{van2023robust,
  title={Robust deformable image registration using cycle-consistent implicit representations},
  author={Van Harten, Louis D and Stoker, Jaap and I{\v{s}}gum, Ivana},
  journal={IEEE Transactions on Medical Imaging},
  year={2023},
  publisher={IEEE}
}
@article{byra2023exploring,
  title={Exploring the performance of implicit neural representations for brain image registration},
  author={Byra, Michal and Poon, Charissa and Rachmadi, Muhammad Febrian and Schlachter, Matthias and Skibbe, Henrik},
  journal={Scientific Reports},
  volume={13},
  number={1},
  pages={17334},
  year={2023},
  publisher={Nature Publishing Group UK London}
}
@article{fischl2012freesurfer,
  title={FreeSurfer},
  author={Fischl, Bruce},
  journal={Neuroimage},
  volume={62},
  number={2},
  pages={774--781},
  year={2012},
  publisher={Elsevier}
}
@article{dubois2016preclinical,
  title={Preclinical Alzheimer's disease: definition, natural history, and diagnostic criteria},
  author={Dubois, Bruno and Hampel, Harald and Feldman, Howard H and Scheltens, Philip and Aisen, Paul and Andrieu, Sandrine and Bakardjian, Hovagim and Benali, Habib and Bertram, Lars and Blennow, Kaj and others},
  journal={Alzheimer's \& Dementia},
  volume={12},
  number={3},
  pages={292--323},
  year={2016},
  publisher={Elsevier}
}
@article{vaswani2017attention,
  title={Attention is all you need},
  author={Vaswani, A},
  journal={Advances in Neural Information Processing Systems},
  year={2017}
}
@inproceedings{rahaman2019spectral,
  title={On the spectral bias of neural networks},
  author={Rahaman, Nasim and Baratin, Aristide and Arpit, Devansh and Draxler, Felix and Lin, Min and Hamprecht, Fred and Bengio, Yoshua and Courville, Aaron},
  booktitle={International conference on machine learning},
  pages={5301--5310},
  year={2019},
  organization={PMLR}
}
@inproceedings{yuce2022structured,
  title={A structured dictionary perspective on implicit neural representations},
  author={Y{\"u}ce, Gizem and Ortiz-Jim{\'e}nez, Guillermo and Besbinar, Beril and Frossard, Pascal},
  booktitle={Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition},
  pages={19228--19238},
  year={2022}
}
@article{planche2022structural,
  title={Structural progression of Alzheimer’s disease over decades: The MRI staging scheme},
  author={Planche, Vincent and Manjon, Jos{\'e} V and Mansencal, Boris and Lanuza, Enrique and Tourdias, Thomas and Catheline, Gwena{\"e}lle and Coup{\'e}, Pierrick},
  journal={Brain Communications},
  volume={4},
  number={3},
  pages={fcac109},
  year={2022},
  publisher={Oxford University Press}
}
@article{genova2019deep,
  title={Deep structured implicit functions},
  author={Genova, Kyle and Cole, Forrester and Sud, Avneesh and Sarna, Aaron and Funkhouser, Thomas},
  journal={arXiv preprint arXiv:1912.06126},
  volume={2},
  pages={2},
  year={2019}
}
@inproceedings{park2019deepsdf,
  title={Deepsdf: Learning continuous signed distance functions for shape representation},
  author={Park, Jeong Joon and Florence, Peter and Straub, Julian and Newcombe, Richard and Lovegrove, Steven},
  booktitle={Proceedings of the IEEE/CVF conference on computer vision and pattern recognition},
  pages={165--174},
  year={2019}
}
@inproceedings{atzmon2020sal,
  title={Sal: Sign agnostic learning of shapes from raw data},
  author={Atzmon, Matan and Lipman, Yaron},
  booktitle={Proceedings of the IEEE/CVF conference on computer vision and pattern recognition},
  pages={2565--2574},
  year={2020}
}
@article{wu2012registration,
  title={Registration of longitudinal brain image sequences with implicit template and spatial--temporal heuristics},
  author={Wu, Guorong and Wang, Qian and Shen, Dinggang and Alzheimer's Disease NeuroImaging Initiative and others},
  journal={NeuroImage},
  volume={59},
  number={1},
  pages={404--421},
  year={2012},
  publisher={Elsevier}
}
@inproceedings{yigitsoy2011temporal,
  title={Temporal groupwise registration for motion modeling},
  author={Yigitsoy, Mehmet and Wachinger, Christian and Navab, Nassir},
  booktitle={Biennial International Conference on Information Processing in Medical Imaging},
  pages={648--659},
  year={2011},
  organization={Springer}
}
@inproceedings{bai2024noder,
  title={NODER: Image Sequence Regression Based on Neural Ordinary Differential Equations},
  author={Bai, Hao and Hong, Yi},
  booktitle={International Conference on Medical Image Computing and Computer-Assisted Intervention},
  pages={673--682},
  year={2024},
  organization={Springer}
}
@inproceedings{wu2024tlrn,
  title={TLRN: Temporal Latent Residual Networks for Large Deformation Image Registration},
  author={Wu, Nian and Xing, Jiarui and Zhang, Miaomiao},
  booktitle={International Conference on Medical Image Computing and Computer-Assisted Intervention},
  pages={728--738},
  year={2024},
  organization={Springer}
}
@article{breijyeh2020comprehensive,
  title={Comprehensive review on Alzheimer’s disease: causes and treatment},
  author={Breijyeh, Zeinab and Karaman, Rafik},
  journal={Molecules},
  volume={25},
  number={24},
  pages={5789},
  year={2020},
  publisher={MDPI}
}
@article{de2019deep,
  title={A deep learning framework for unsupervised affine and deformable image registration},
  author={De Vos, Bob D and Berendsen, Floris F and Viergever, Max A and Sokooti, Hessam and Staring, Marius and I{\v{s}}gum, Ivana},
  journal={Medical image analysis},
  volume={52},
  pages={128--143},
  year={2019},
  publisher={Elsevier}
}
@article{lachinov2023learning,
  title={Learning spatio-temporal model of disease progression with NeuralODEs from longitudinal volumetric data},
  author={Lachinov, Dmitrii and Chakravarty, Arunava and Grechenig, Christoph and Schmidt-Erfurth, Ursula and Bogunovi{\'c}, Hrvoje},
  journal={IEEE Transactions on Medical Imaging},
  year={2023},
  publisher={IEEE}
}
@article{lee2023seq2morph,
  title={Seq2Morph: A deep learning deformable image registration algorithm for longitudinal imaging studies and adaptive radiotherapy},
  author={Lee, Donghoon and Alam, Sadegh and Jiang, Jue and Cervino, Laura and Hu, Yu-Chi and Zhang, Pengpeng},
  journal={Medical physics},
  volume={50},
  number={2},
  pages={970--979},
  year={2023},
  publisher={Wiley Online Library}
}
@article{dong2021deepatrophy,
  title={DeepAtrophy: Teaching a neural network to detect progressive changes in longitudinal MRI of the hippocampal region in Alzheimer's disease},
  author={Dong, Mengjin and Xie, Long and Das, Sandhitsu R and Wang, Jiancong and Wisse, Laura EM and DeFlores, Robin and Wolk, David A and Yushkevich, Paul A and Alzheimer's Disease Neuroimaging Initiative and others},
  journal={Neuroimage},
  volume={243},
  pages={118514},
  year={2021},
  publisher={Elsevier}
}
@article{dong2024regional,
  title={Regional deep atrophy: Using temporal information to automatically identify regions associated with Alzheimer’s disease progression from longitudinal MRI},
  author={Dong, Mengjin and Xie, Long and Das, Sandhitsu R and Wang, Jiancong and Wisse, Laura EM and deFlores, Robin and Wolk, David A and Yushkevich, Paul A},
  journal={Imaging Neuroscience},
  volume={2},
  pages={1--23},
  year={2024},
  publisher={MIT Press 255 Main Street, 9th Floor, Cambridge, Massachusetts 02142, USA~…}
}
@article{robinson2018multimodal,
  title={Multimodal surface matching with higher-order smoothness constraints},
  author={Robinson, Emma C and Garcia, Kara and Glasser, Matthew F and Chen, Zhengdao and Coalson, Timothy S and Makropoulos, Antonios and Bozek, Jelena and Wright, Robert and Schuh, Andreas and Webster, Matthew and others},
  journal={Neuroimage},
  volume={167},
  pages={453--465},
  year={2018},
  publisher={Elsevier}
}
@article{metz2011nonrigid,
  title={Nonrigid registration of dynamic medical imaging data using nD+ t B-splines and a groupwise optimization approach},
  author={Metz, Coert T and Klein, Stefan and Schaap, Michiel and van Walsum, Theo and Niessen, Wiro J},
  journal={Medical image analysis},
  volume={15},
  number={2},
  pages={238--249},
  year={2011},
  publisher={Elsevier}
}
@inproceedings{sideri2024sinr,
  title={SINR: Spline-enhanced implicit neural representation for multi-modal registration},
  author={Sideri-Lampretsa, Vasiliki and McGinnis, Julian and Qiu, Huaqi and Paschali, Magdalini and Simson, Walter and Rueckert, Daniel},
  booktitle={Medical Imaging with Deep Learning},
  year={2024}
}
@article{rohlfing2011image,
  title={Image similarity and tissue overlaps as surrogates for image registration accuracy: widely used but unreliable},
  author={Rohlfing, Torsten},
  journal={IEEE transactions on medical imaging},
  volume={31},
  number={2},
  pages={153--163},
  year={2011},
  publisher={IEEE}
}
@article{savitzky2018image,
  title={Image registration of low signal-to-noise cryo-STEM data},
  author={Savitzky, Benjamin H and El Baggari, Ismail and Clement, Colin B and Waite, Emily and Goodge, Berit H and Baek, David J and Sheckelton, John P and Pasco, Christopher and Nair, Hari and Schreiber, Nathaniel J and others},
  journal={Ultramicroscopy},
  volume={191},
  pages={56--65},
  year={2018},
  publisher={Elsevier}
}
@article{reuter2010highly,
  title={Highly accurate inverse consistent registration: a robust approach},
  author={Reuter, Martin and Rosas, H Diana and Fischl, Bruce},
  journal={Neuroimage},
  volume={53},
  number={4},
  pages={1181--1196},
  year={2010},
  publisher={Elsevier}
}
@article{qiu2009time,
  title={Time sequence diffeomorphic metric mapping and parallel transport track time-dependent shape changes},
  author={Qiu, Anqi and Albert, Marilyn and Younes, Laurent and Miller, Michael I},
  journal={NeuroImage},
  volume={45},
  number={1},
  pages={S51--S60},
  year={2009},
  publisher={Elsevier}
}
@article{vasiliuk2023limitations,
  title={Limitations of out-of-distribution detection in 3d medical image segmentation},
  author={Vasiliuk, Anton and Frolova, Daria and Belyaev, Mikhail and Shirokikh, Boris},
  journal={Journal of Imaging},
  volume={9},
  number={9},
  pages={191},
  year={2023},
  publisher={MDPI}
}
@inproceedings{han2020deep,
  title={A deep network for joint registration and reconstruction of images with pathologies},
  author={Han, Xu and Shen, Zhengyang and Xu, Zhenlin and Bakas, Spyridon and Akbari, Hamed and Bilello, Michel and Davatzikos, Christos and Niethammer, Marc},
  booktitle={Machine Learning in Medical Imaging: 11th International Workshop, MLMI 2020, Held in Conjunction with MICCAI 2020, Lima, Peru, October 4, 2020, Proceedings 11},
  pages={342--352},
  year={2020},
  organization={Springer}
}
@article{chung2001unified,
  title={A unified statistical approach to deformation-based morphometry},
  author={Chung, Moo K and Worsley, Keith J and Paus, Tom{\'a}s and Cherif, C and Collins, D Louis and Giedd, Jay N and Rapoport, Judith L and Evans, Alan C},
  journal={NeuroImage},
  volume={14},
  number={3},
  pages={595--606},
  year={2001},
  publisher={Elsevier}
}
@article{whitwell2009voxel,
  title={Voxel-based morphometry: an automated technique for assessing structural changes in the brain},
  author={Whitwell, Jennifer L},
  journal={Journal of Neuroscience},
  volume={29},
  number={31},
  pages={9661--9664},
  year={2009},
  publisher={Soc Neuroscience}
}
@article{durrleman2013toward,
  title={Toward a comprehensive framework for the spatiotemporal statistical analysis of longitudinal shape data},
  author={Durrleman, Stanley and Pennec, Xavier and Trouv{\'e}, Alain and Braga, Jos{\'e} and Gerig, Guido and Ayache, Nicholas},
  journal={International journal of computer vision},
  volume={103},
  pages={22--59},
  year={2013},
  publisher={Springer}
}
@article{wijeratne2023temporal,
  title={The temporal event-based model: Learning event timelines in progressive diseases},
  author={Wijeratne, Peter A and Eshaghi, Arman and Scotton, William J and Kohli, Maitrei and Aksman, Leon and Oxtoby, Neil P and Pustina, Dorian and Warner, John H and Paulsen, Jane S and Scahill, Rachael I and others},
  journal={Imaging Neuroscience},
  volume={1},
  pages={1--19},
  year={2023},
  publisher={MIT Press One Broadway, 12th Floor, Cambridge, Massachusetts 02142, USA~…}
}
@article{shuaibu2024hyperpredict,
  title={HyperPredict: Estimating Hyperparameter Effects for Instance-Specific Regularization in Deformable Image Registration},
  author={Shuaibu, Aisha L and Simpson, Ivor JA},
  journal={arXiv preprint arXiv:2403.02069},
  year={2024}
}
@article{abi2020monotonic,
  title={Monotonic Gaussian Process for spatio-temporal disease progression modeling in brain imaging data},
  author={Abi Nader, Clement and Ayache, Nicholas and Robert, Philippe and Lorenzi, Marco and Alzheimer’s Disease Neuroimaging Initiative and others},
  journal={Neuroimage},
  volume={205},
  pages={116266},
  year={2020},
  publisher={Elsevier}
}
@article{kohl2018probabilistic,
  title={A probabilistic u-net for segmentation of ambiguous images},
  author={Kohl, Simon and Romera-Paredes, Bernardino and Meyer, Clemens and De Fauw, Jeffrey and Ledsam, Joseph R and Maier-Hein, Klaus and Eslami, SM and Jimenez Rezende, Danilo and Ronneberger, Olaf},
  journal={Advances in neural information processing systems},
  volume={31},
  year={2018}
}
@article{dalca2019learning,
  title={Learning conditional deformable templates with convolutional networks},
  author={Dalca, Adrian and Rakic, Marianne and Guttag, John and Sabuncu, Mert},
  journal={Advances in neural information processing systems},
  volume={32},
  year={2019}
}
@article{hoopes2022learning,
  title={Learning the effect of registration hyperparameters with hypermorph},
  author={Hoopes, Andrew and Hoffmann, Malte and Greve, Douglas N and Fischl, Bruce and Guttag, John and Dalca, Adrian V},
  journal={The journal of machine learning for biomedical imaging},
  volume={1},
  pages={003},
  year={2022}
}
@article{hua2013unbiased,
  title={Unbiased tensor-based morphometry: improved robustness and sample size estimates for Alzheimer's disease clinical trials},
  author={Hua, Xue and Hibar, Derrek P and Ching, Christopher RK and Boyle, Christina P and Rajagopalan, Priya and Gutman, Boris A and Leow, Alex D and Toga, Arthur W and Jack Jr, Clifford R and Harvey, Danielle and others},
  journal={Neuroimage},
  volume={66},
  pages={648--661},
  year={2013},
  publisher={Elsevier}
}
@inproceedings{van2024reindir,
  title={REINDIR: Repeated Embedding Infusion for Neural Deformable Image Registration},
  author={van Harten, Louis and Van Herten, Rudolf Leonardus Mirjam and Isgum, Ivana},
  booktitle={Medical Imaging with Deep Learning},
  year={2024}
}
@article{ha2016hypernetworks,
  title={Hypernetworks},
  author={Ha, David and Dai, Andrew and Le, Quoc V},
  journal={arXiv preprint arXiv:1609.09106},
  year={2016}
}
@article{mccolgan2023tominersen,
  title={Tominersen in adults with manifest Huntington's disease},
  author={McColgan, Peter and Thobhani, Alpa and Boak, Lauren and Schobel, Scott A and Nicotra, Alessia and Palermo, Giuseppe and Trundell, Dylan and Zhou, Julian and Schlegel, Valerie and Sanwald Ducray, Patricia and others},
  journal={The New England journal of medicine},
  volume={389},
  number={23},
  pages={2203--2205},
  year={2023},
  publisher={Massachusetts Medical Society}
}
@inproceedings{mok2021conditional,
  title={Conditional deformable image registration with convolutional neural network},
  author={Mok, Tony CW and Chung, Albert CS},
  booktitle={Medical Image Computing and Computer Assisted Intervention--MICCAI 2021: 24th International Conference, Strasbourg, France, September 27--October 1, 2021, Proceedings, Part IV 24},
  pages={35--45},
  year={2021},
  organization={Springer}
}