This is the Supplymentary codes for reproducibility of "HiCBridge: Resolution Enhancemetn of Hi-C Data Using Direct Diffusion Brdige"

We followed the code based on <https://github.com/Max-Highsmith/VEHiCLE>
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## Contents of Folders

Data : This folder includes the raw data and data loader with pre-processing Hi-C data (.hic files) into contact maps (.npy)
Experiments : This folder contains various experiments to measure model performances.
Models : This folder contains the model architectures originating from previous papers. Due to the limitation of supplymentary storage, we only upload our model HiCBridge+.
other_tools : This folder involves how we use other tools, such as 3DMax and Juicer tool. Please refer the readme.md file in this folder for future works.
Trained_Models : This folder has trained model .ckpt files for reproducibility our experiments
Utils : This folder contains useful tools for measuring metrics, pre-processing, or calculating losses.

## Hi-C data acquisition

Like in previous study, we used Hi-C data from GSE63525.  
Datasets are programatically downloaded and formatted via the dataloader objects.

