clear; gensit summarise -dn DC/exp1 -et SIM_NN \
-el np -el MathUtils -el xr \
-e intensity_ssi_test_mean "intensity_ssi_test_by_seed.mean('seed',dtype='float64',skipna=True)" \
-e intensity_ssi_test_std "intensity_ssi_test_by_seed.std('seed',dtype='float64',skipna=True)" \
-ea intensity \
-ea "intensity_mean=intensity.groupby('seed').mean('iter',dtype='float64')" \
-ea "intensity_ssi_test_by_seed=intensity_mean.groupby('seed').map(MathUtils.ssi,ground_truth=outputs.inputs.data.ground_truth_table,mask=outputs.inputs.data.test_cells_mask)" \
-btt 'iter' 10000 9 10000 \
-k sigma -k type -k name -k title -fe total_constrained_intensity_SSIs -nw 1

clear; gensit summarise -dn DC/exp1 -et NonJointTableSIM_NN  \
-el np -el MathUtils -el xr \
-e intensity_ssi_test "intensity.mean('iter').groupby('sweep').map(MathUtils.ssi,ground_truth=ground_truth,mask=test_cells_mask)" \
-ea intensity \
-ea "ground_truth=outputs.inputs.data.ground_truth_table" \
-ea "test_cells_mask=outputs.inputs.data.test_cells_mask" \
-btt 'iter' 10000 9 10000 \
-k sigma -k type -k name -k title -fe total_constrained_intensity_SSIs -nw 1

clear; gensit summarise -dn DC/exp1/ -d JointTableSIM_NN_SweepedNoise__totally_and_cell_constrained_21_05_2024_13_25_40  \
-el np -el MathUtils -el xr \
-e intensity_ssi_test "intensity.mean('iter').groupby('sweep').map(MathUtils.ssi,ground_truth=ground_truth,mask=test_cells_mask)" \
-ea intensity \
-ea "ground_truth=outputs.inputs.data.ground_truth_table" \
-ea "test_cells_mask=outputs.inputs.data.test_cells_mask" \
-btt 'iter' 10000 9 10000 \
-k sigma -k type -k name -k title -fe total_constrained_intensity_SSIs -nw 1


clear; gensit summarise -dn DC/exp1 -et NonJointTableSIM_NN \
-el np -el MathUtils -el xr \
-e table_ssi_test "MathUtils.ssi(prediction=table_mean,ground_truth=ground_truth,mask=test_cells_mask)" \
-ea table \
-ea "table_mean=table.mean('iter',dtype='float64')" \
-ea "ground_truth=outputs.inputs.data.ground_truth_table" \
-ea "test_cells_mask=outputs.inputs.data.test_cells_mask" \
-btt 'iter' 10000 9 10000 \
-k sigma -k type -k name -k title -fe total_constrained_table_SSIs -nw 1


clear; gensit summarise -dn DC/exp1/ -d JointTableSIM_NN_SweepedNoise__totally_and_cell_constrained_21_05_2024_13_25_40  \
-el np -el MathUtils -el xr \
-e table_ssi_test "MathUtils.ssi(prediction=table_mean,ground_truth=ground_truth,mask=test_cells_mask)" \
-ea table \
-ea "table_mean=table.mean('iter',dtype='float64')" \
-ea "ground_truth=outputs.inputs.data.ground_truth_table" \
-ea "test_cells_mask=outputs.inputs.data.test_cells_mask" \
-btt 'iter' 10000 9 10000 \
-k sigma -k type -k name -k title -fe total_constrained_table_SSIs -nw 1
