/data/home/weiyb/miniconda3/envs/NLGraph/lib/python3.10/site-packages/torchvision/models/_utils.py:208: UserWarning: The parameter 'pretrained' is deprecated since 0.13 and may be removed in the future, please use 'weights' instead.
  warnings.warn(
/data/home/weiyb/miniconda3/envs/NLGraph/lib/python3.10/site-packages/torchvision/models/_utils.py:223: UserWarning: Arguments other than a weight enum or `None` for 'weights' are deprecated since 0.13 and may be removed in the future. The current behavior is equivalent to passing `weights=ResNet50_Weights.IMAGENET1K_V1`. You can also use `weights=ResNet50_Weights.DEFAULT` to get the most up-to-date weights.
  warnings.warn(msg)
cat_node_feat_mf:  False
cat_n2v_feat:  False
Namespace(use_val_edges_as_input=False, data_name='cora', neg_mode='equal', gnn_model='GCN', score_model='mlp_score', load=None, loadmod=False, savemod=False, num_layers=1, num_layers_predictor=3, hidden_channels=128, dropout=0.3, batch_size=256, lr=0.005, epochs=1000, eval_steps=5, runs=5, kill_cnt=10, output_dir='/data/home/weiyb/HeaRT/checkpoints/GNN', l2=0.0001, seed=42, velr=0.0001, fslr=0.0001, hop_num=2, id=3, feat=10, VE='resnet50_tuned', test=False, layout_aug=False, save=False, use_saved_model=False, metric='MRR', device=0, log_steps=1, gin_mlp_layer=2, gat_head=1, cat_node_feat_mf=False, cat_n2v_feat=False)
the number of nodes in cora is:  2708
2708 tensor(2707)
dataset split 
train edge 4488
valid edge 263
valid edge_neg 263
test edge 527
test edge_neg 527
#################################           0           #################################
seed:  0
No saved model parameters found. Starting training from scratch.
layers in gcn:  1
train valid_pos valid_neg test_pos test_neg torch.Size([263]) torch.Size([263]) torch.Size([263]) torch.Size([527]) torch.Size([527])
Hits@1
2024-06-25 15:58:16,870 - [INFO] - Run: 01, Epoch: 05, Loss: 0.0072, Valid: 1.90%, Test: 0.19%
Hits@3
2024-06-25 15:58:16,871 - [INFO] - Run: 01, Epoch: 05, Loss: 0.0072, Valid: 2.28%, Test: 0.38%
Hits@10
2024-06-25 15:58:16,871 - [INFO] - Run: 01, Epoch: 05, Loss: 0.0072, Valid: 2.66%, Test: 0.76%
Hits@100
2024-06-25 15:58:16,871 - [INFO] - Run: 01, Epoch: 05, Loss: 0.0072, Valid: 38.78%, Test: 9.87%
MRR
2024-06-25 15:58:16,871 - [INFO] - Run: 01, Epoch: 05, Loss: 0.0072, Valid: 3.12%, Test: 0.91%
AUC
2024-06-25 15:58:16,871 - [INFO] - Run: 01, Epoch: 05, Loss: 0.0072, Valid: 42.22%, Test: 39.63%
AP
2024-06-25 15:58:16,871 - [INFO] - Run: 01, Epoch: 05, Loss: 0.0072, Valid: 46.92%, Test: 43.82%
---
Best Current: 0.91_5
Traceback (most recent call last):
  File "/data/home/weiyb/GVN-cache/GVN/benchmarking/exist_setting_small/main_vgnn.py", line 627, in <module>
    main()
  File "/data/home/weiyb/GVN-cache/GVN/benchmarking/exist_setting_small/main_vgnn.py", line 545, in main
    loss = train(args, feature_extractor, graph_visualizer, fusion_module, data, model, train_pos, optimizer, args.batch_size)
  File "/data/home/weiyb/GVN-cache/GVN/benchmarking/exist_setting_small/main_vgnn.py", line 276, in train
    generate_graph_images(train_neg_perm_list, False, args, graph_visualizer,  data)
  File "/data/home/weiyb/GVN-cache/GVN/benchmarking/exist_setting_small/main_vgnn.py", line 164, in generate_graph_images
    graph_visualizer.convert_graph_to_image(
  File "/data/home/weiyb/GVN-cache/GVN/benchmarking/exist_setting_small/../visual_integrater.py", line 69, in convert_graph_to_image
    dot.render(filename=file_path, cleanup=True)
  File "/data/home/weiyb/miniconda3/envs/NLGraph/lib/python3.10/site-packages/graphviz/_tools.py", line 171, in wrapper
    return func(*args, **kwargs)
  File "/data/home/weiyb/miniconda3/envs/NLGraph/lib/python3.10/site-packages/graphviz/rendering.py", line 126, in render
    os.remove(filepath)
FileNotFoundError: [Errno 2] No such file or directory: './dataset/cora/2586_67'
