Abstract: Author Summary Communication between neurons underlies all perception and cognition. Hence, to understand how the brain's sensory systems such as the visual cortex work, we need to model how neurons encode and communicate information about the world. To this end, we simultaneously recorded the activity of many neurons in a cortical column, a fundamental building block of information processing in the brain. This allows us to discover statistical structure in their activity, a first step to uncovering communication pathways and coding principles. To capture the statistical structure of firing patterns, we fit models that assign a probability to each observed pattern. Fitting probability distributions is generally difficult because the model probabilities of all possible states have to sum to one, and enumerating all possible states in a large system is not possible. Making use of recent advances in parameter estimation, we are able to fit models and test the quality of the fit to the data. The resulting model parameters can be interpreted as the effective connectivity between groups of cells, thus revealing patterns of interaction between neurons in a cortical circuit.
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