A computational framework to unify representation similarity and function in biological and artificial neural networks

Xuming Ran, Jie Zhang, Ziyuan Ye, Haiyan Wu, Qi Xu, Huihui Zhou, Quanying Liu

Abstract: Artificial neural network (ANN) is a versatile tool to study the neural representation in the ventral visual stream, and the knowledge in neuroscience in return inspires ANN models to improve performance in the task. However, it is still unclear how to merge these two directions into a unified framework. In this study, we propose an integrated framework called Deep Autoencoder with Neural Response (DAE-NR), which incorporates information from ANN and the visual cortex to achieve better image reconstruction performance and higher neural representation similarity between biological and artificial neurons. The same visual stimuli (i.e., natural images) are input to both the mice brain and DAE-NR. The encoder of DAE-NR jointly learns the dependencies from neural spike encoding and image reconstruction. For the neural spike encoding task, the features derived from a specific hidden layer of the encoder are transformed by a mapping function to predict the ground-truth neural response under the constraint of image reconstruction. Simultaneously, for the image reconstruction task, the latent representation obtained by the encoder is assigned to a decoder to restore the original image under the guidance of neural information. In DAE-NR, the learning process of encoder, mapping function and decoder are all implicitly constrained by these two tasks. Our experiments demonstrate that if and only if with the joint learning, DAE-NRs can improve the performance of visual image reconstruction and increase the representation similarity between biological neurons and artificial neurons. The DAE-NR offers a new perspective on the integration of computer vision and neuroscience.

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