Novel multi-cluster workflow system to support real-time HPC-enabled epidemic science: Investigating the impact of vaccine acceptance on COVID-19 spread

Parantapa Bhattacharya, Dustin Machi, Jiangzhuo Chen, Stefan Hoops, Bryan Lewis, Henning S. Mortveit, Srinivasan Venkatramanan, Mandy L. Wilson, Achla Marathe, Przemyslaw J. Porebski, Brian Klahn, Joseph Outten, Anil Vullikanti, Dawen Xie, Abhijin Adiga, Shawn Brown, Christopher L. Barrett, Madhav V. Marathe

Abstract: Highlights•Presents MacKenzie, a novel multi-cluster HPC job scheduler.•A novel workflow that reduces execution time and improves productivity.•Detailed, fine-grained, data driven epidemic models.•Detailed analysis of the COVID-19 vaccine allocation problem.•Real world workflow; has been used repeatedly brief VA and Federal policymakers.