Speckle and Shadows: Ultrasound-specific Physics-based Data Augmentation for Kidney Segmentation

Rohit Singla, Cailin Ringstrom, Ricky Hu, Victoria A. Lessoway, Janice Reid, Robert Rohling, Christopher Y. Nguan

Abstract: Techniques for data augmentation are widely employed to avoid overfitting, improve generalizability and overcome data scarcity. This data-oriented approach frequently uses domain-agnostic approaches such as geometric transformations, colour space transformations, and generative adversarial networks. However, utilsing domain-specific characteristics in augmentations may result in additional invariances or improved robustness. We present several augmentation techniques for ultrasound: zoom, time-gain compensation, artificial shadowing, and speckle parameter maps. Zoom and time-gain compensation mimic traditional image quality parameters. For shadowing, we characterize acoustic shadows within abdominal ultrasound images and provide a method for incorporating artificial shadows into existing images. Finally, we transform B-mode ultrasound images into Nakagami-based speckle parameter maps to describe spatial structures that are not visible in conventional B-mode. The augmentations are evaluated by training a fully supervised network and a contrastive learning network for multi-class intra-organ semantic segmentation. Our preliminary results reflect the difficulties of creating augmentations as well as the limitations posed by acoustic shadowing.