Carl Herrmann

Full Professor, IPMB, Ruprecht-Karls-Universität Heidelberg

Joined

May 2025

Names

Carl Herrmann (Preferred)

Emails

****@uni-heidelberg.de (Confirmed)

Personal Links

Career & Education History

Full Professor

IPMB, Ruprecht-Karls-Universität Heidelberg (uni-heidelberg.de)

2023 – Present

Associate Professor

Medical Faculty, Ruprecht-Karls-Universität Heidelberg (uni-heidelberg.de)

2018 – 2023

Advisors, Relations & Conflicts

Coauthor

Michael Backes

2017 – 2017

Coauthor

Laurent Tichit

2005 – 2008

Expertise

bioinformatics

2003 – 2025

theoretical physics

1998 – 2003

Publications

Sparse Data Diffusion for Scientific Simulations in Biology and Physics
Phil Ostheimer, Mayank Nagda, Andriy Balinskyy, Jean Radig, Carl Herrmann, Stephan Mandt, Marius Kloft, Sophie Fellenz
- SIMBIOCHEM 2025 Spotlight
- Readers: Everyone
dsMTL: a computational framework for privacy-preserving, distributed multi-task machine learning
Han Cao, Youcheng Zhang, Jan Baumbach, Paul R. Burton, Dominic B. Dwyer, Nikolaos Koutsouleris, Julian O. Matschinske, Yannick Marcon, Sivanesan Rajan, Thilo Rieg, Patricia Ryser-Welch, Julian Späth, Carl Herrmann, Emanuel Schwarz
- Bioinform. 2022
- Readers: Everyone
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
Esther Rheinbay, Morten Muhlig Nielsen, Federico Abascal, Jeremiah Wala, Ofer Shapira, Grace Tiao, Henrik Hornshøj, Julian M. Hess, Randi Istrup Juul, Ziao Lin, Lars Feuerbach, Radhakrishnan Sabarinathan, Tobias Madsen, Jaegil Kim, Loris Mularoni, Shimin Shuai, Andrés Lanzós, Carl Herrmann, Yosef E. Maruvka, Ciyue Shen et al. (169 additional authors not shown)
- 2020 (modified: 03 Nov 2022)
- Nat. 2020
- Readers: Everyone
Identifying Personal DNA Methylation Profiles by Genotype Inference
Michael Backes, Pascal Berrang, Matthias Bieg, Roland Eils, Carl Herrmann, Mathias Humbert, Irina Lehmann
- Published: 01 Jan 2017, Last Modified: 12 May 2023
- IEEE Symposium on Security and Privacy 2017
- Readers: Everyone
LedPred: an R/bioconductor package to predict regulatory sequences using support vector machines
Denis Seyres, Elodie Darbo, Laurent Perrin, Carl Herrmann, Aitor González
- Bioinform. 2016
- Readers: Everyone
A comprehensive comparison of tools for differential ChIP-seq analysis
Sebastian Steinhauser, Nils Kurzawa, Roland Eils, Carl Herrmann
- Published: 01 Jan 2016, Last Modified: 15 May 2023
- Briefings Bioinform. 2016
- Readers: Everyone
RSAT 2015: Regulatory Sequence Analysis Tools
Alejandra Medina-Rivera, Matthieu Defrance, Olivier Sand, Carl Herrmann, Jaime Abraham Castro-Mondragón, Jeremy Delerce, Sébastien Jaeger, Christophe Blanchet, Pierre Vincens, Christophe Caron, Daniel M. Staines, Bruno Contreras-Moreira, Marie Artufel, Lucie Charbonnier-Khamvongsa, Céline Hernandez, Denis Thieffry, Morgane Thomas-Chollier, Jacques van Helden
- Nucleic Acids Res. 2015
- Readers: Everyone
MapMyFlu: visualizing spatio-temporal relationships between related influenza sequences
Nicholas Nolte, Nils Kurzawa, Roland Eils, Carl Herrmann
- Published: 01 Jan 2015, Last Modified: 15 May 2023
- Nucleic Acids Res. 2015
- Readers: Everyone
RSAT 2011: regulatory sequence analysis tools
Morgane Thomas-Chollier, Matthieu Defrance, Alejandra Medina-Rivera, Olivier Sand, Carl Herrmann, Denis Thieffry, Jacques van Helden
- Nucleic Acids Res. 2011
- Readers: Everyone
SimCT: a generic tool to visualize ontology-based relationships for biological objects
Carl Herrmann, Sèverine Bérard, Laurent Tichit
- Bioinform. 2009
- Readers: Everyone

View all 12 publications

Co-Authors

View all 247 co-authors