Daifeng Wang

Associate Professor, University of Wisconsin - Madison

Joined

April 2021

Names

Daifeng Wang (Preferred)

Emails

****@wisc.edu (Confirmed)

Personal Links

Career & Education History

Associate Professor

University of Wisconsin - Madison (wisc.edu)

2023 – Present

Assistant Professor

University of Wisconsin, Madison (wisc.edu)

2019 – 2023

Assistant Professor

State University of New York, Stony Brook (stonybrook.edu)

2016 – 2019

Postdoc

Yale University (yale.edu)

2012 – 2016

PhD student

University of Texas, Austin (utexas.edu)

2006 – 2011

Advisors, Relations & Conflicts

No relations added

Expertise

transfer learning

2018 – Present

human intelligence

2018 – Present

multiview learning

2016 – Present

regularized learning

2016 – Present

neuroscience

2010 – Present

bioinformatics

2008 – Present

network science

2006 – Present

manifold learning

2006 – Present

dimensionality reduction

2006 – Present

Publications

Illuminating links between cis-regulators and trans-acting variants in the human prefrontal cortex
Yudi Mu, Shuang Liu, Hyejung Won, Declan Clarke, Saniya Khullar, Daifeng Wang, Mark Gerstein
- OpenReview Archive Direct Upload
- Readers: Everyone
Multiview learning for understanding functional multiomics
Nam D. Nguyen, Daifeng Wang
- 2020 (modified: 03 Nov 2022)
- PLoS Comput. Biol. 2020
- Readers: Everyone
Interpretable Machine Learning Approach Reveals Developmental Gene Expression Biomarkers for Cancer Patient Outcomes at Early Stages
Alisha Kamat, Ting Jin, So Yeon Min, Flaminia Talos, Jonas S. Almeida, Daifeng Wang
- 2018 (modified: 14 May 2025)
- BCB 2018
- Readers: Everyone
Multiple-Swarm Ensembles: Improving the Predictive Power and Robustness of Predictive Models and Its Use in Computational Biology
Pedro Alves, Shuang Liu, Daifeng Wang, Mark Gerstein
- 2018 (modified: 15 May 2023)
- IEEE ACM Trans. Comput. Biol. Bioinform. 2018
- Readers: Everyone
A Manifold Learning Based Approach to Reveal the Functional Linkages across Multiple Gene Networks
Nam Nguyen, Ian Blaby, Daifeng Wang
- 2018 (modified: 03 Nov 2022)
- BCB 2018
- Readers: Everyone
DREISS: Using State-Space Models to Infer the Dynamics of Gene Expression Driven by External and Internal Regulatory Networks
Daifeng Wang, Fei He, Sergei Maslov, Mark Gerstein
- 2016 (modified: 15 May 2023)
- PLoS Comput. Biol. 2016
- Readers: Everyone
Loregic: A Method to Characterize the Cooperative Logic of Regulatory Factors
Daifeng Wang, Koon-Kiu Yan, Cristina Sisu, Chao Cheng, Joel S. Rozowsky, William Meyerson, Mark B. Gerstein
- 2015 (modified: 03 Nov 2022)
- PLoS Comput. Biol. 2015
- Readers: Everyone
Comparative analysis of regulatory information and circuits across distant species Open
Alan P. Boyle, Carlos L. Araya, Cathleen Brdlik, Philip Cayting, Chao Cheng, Yong Cheng, Kathryn Gardner, LaDeana W. Hillier, Judith Janette, Lixia Jiang, Dionna Kasper, Trupti Kawli, Pouya Kheradpour, Anshul Kundaje, Jingyi Jessica Li, Lijia Ma, Wei Niu, E. Jay Rehm, Joel S. Rozowsky, Matthew Slattery et al. (20 additional authors not shown)
- 2014 (modified: 22 Jan 2026)
- Nat. 2014
- Readers: Everyone
Comparative network analysis of gene co-expression networks reveals the conserved and species-specific functions of cell-wall related genes between Arabidopsis and Poplar
Daifeng Wang, Eric Pan, Gang Fang, Sunita Kumari, Fei He, Doreen Ware, Sergei Maslov, Mark Gerstein
- 2013 (modified: 15 May 2023)
- BCB 2013
- Readers: Everyone
Eigen-Genomic System Dynamic-Pattern Analysis (ESDA): Modeling mRNA Degradation and Self-Regulation
Daifeng Wang, Mia K. Markey, Claus O. Wilke, Ari Arapostathis
- 2012 (modified: 03 Nov 2022)
- IEEE ACM Trans. Comput. Biol. Bioinform. 2012
- Readers: Everyone

View all 12 publications

Co-Authors

View all 69 co-authors