Daisuke Kihara

Full Professor, Biological Sci/Computer Sci, Purdue University

Joined

July 2019

Names

Daisuke Kihara

Emails

****@purdue.edu (Confirmed)

Personal Links

Career & Education History

Full Professor

Biological Sci/Computer Sci, Purdue University (purdue.edu)

2014 – Present

Advisors, Relations & Conflicts

Postdoc Advisor

Jeffrey Skolnick

1999 – 2003

PhD Advisor

Minoru Kanehisa

1994 – 1999

Expertise

bioinformatics

Present

protein structure prediction

Present

Publications

Distance-AF: modifying predicted protein structure models by alphafold2 with user-specified distance constraints
Yuanyuan Zhang, Zicong Zhang, Yuki Kagaya, Genki Terashi, Bowen Zhao, Yi Xiong, Daisuke Kihara
- BioRxiv
- Readers: Everyone
https://www.nature.com/articles/s41592-022-01574-4
Daisuke Kihara
- 17 Nov 2022
- OpenReview Archive Direct Upload
- Readers: Everyone
On the Importance of Asymmetry for Siamese Representation Learning
Xiao Wang, Haoqi Fan, Yuandong Tian, Daisuke Kihara, Xinlei Chen
- 2022 (modified: 18 Nov 2022)
- CoRR 2022
- Readers: Everyone
SHREC 2022: Protein-ligand binding site recognition
Luca Gagliardi, Andrea Raffo, Ulderico Fugacci, Silvia Biasotti, Walter Rocchia, Hao Huang, Boulbaba Ben Amor, Yi Fang, Yuanyuan Zhang, Xiao Wang, Charles Christoffer, Daisuke Kihara, Apostolos Axenopoulos, Stelios K. Mylonas, Petros Daras
- 2022 (modified: 18 Nov 2022)
- Comput. Graph. 2022
- Readers: Everyone
SHREC 2021: Classification in cryo-electron tomograms
Ilja Gubins, Marten L. Chaillet, Gijs van der Schot, M. Cristina Trueba, Remco C. Veltkamp, Friedrich Förster, Xiao Wang, Daisuke Kihara, Emmanuel Moebel, Nguyen P. Nguyen, Tommi A. White, Filiz Bunyak, Giorgos Papoulias, Stavros Gerolymatos, Evangelia I. Zacharaki, Konstantinos Moustakas, Xiangrui Zeng, Sinuo Liu, Min Xu, Yaoyu Wang et al. (3 additional authors not shown)
- 2022 (modified: 18 Nov 2022)
- CoRR 2022
- Readers: Everyone
On the Importance of Asymmetry for Siamese Representation Learning
Xiao Wang, Haoqi Fan, Yuandong Tian, Daisuke Kihara, Xinlei Chen
- 2022 (modified: 18 Nov 2022)
- CVPR 2022
- Readers: Everyone
Using steered molecular dynamic tension for assessing quality of computational protein structure models
Lyman Monroe, Daisuke Kihara
- 2022 (modified: 18 Nov 2022)
- J. Comput. Chem. 2022
- Readers: Everyone
LZerD webserver for pairwise and multiple protein-protein docking
Charles Christoffer, Siyang Chen, Vijay Bharadwaj, Tunde Aderinwale, Vidhur Kumar, Matin Hormati, Daisuke Kihara
- 2021 (modified: 18 Nov 2022)
- Nucleic Acids Res. 2021
- Readers: Everyone
EnAET: A Self-Trained Framework for Semi-Supervised and Supervised Learning With Ensemble Transformations
Xiao Wang, Daisuke Kihara, Jiebo Luo, Guo-Jun Qi
- 2021 (modified: 18 Nov 2022)
- IEEE Trans. Image Process. 2021
- Readers: Everyone
Protein contact map refinement for improving structure prediction using generative adversarial networks
Sai Raghavendra Maddhuri Venkata Subramaniya, Genki Terashi, Aashish Jain, Yuki Kagaya, Daisuke Kihara
- 2021 (modified: 18 Nov 2022)
- Bioinform. 2021
- Readers: Everyone

View all 74 publications

Co-Authors

View all 200 co-authors