Frederic Runge

PhD student, Universität Freiburg

Joined

November 2018

Names

Frederic Runge (Preferred)

Emails

****@cs.uni-freiburg.de (Confirmed)

Personal Links

Homepage

Career & Education History

PhD student

Universität Freiburg (uni-freiburg.de)

Present

Advisors, Relations & Conflicts

No relations added

Expertise

No areas of expertise listed

Publications

Synthetic RNA Evolution Enables Accurate Alignment-Free 3D Structure Prediction
Jörg K.H. Franke, Iris K. Tennie, Michael Uhl, Ryan Koksal, Dominika Matus, Frank Hutter, Rolf Backofen, Frederic Runge
- GEM 2026
- Readers: Everyone
STRAND: Structure Refinement of RNA-Protein Complexes via Diffusion
Mohsen Al-zeqri, Jörg K.H. Franke, Frederic Runge
- GenBio 2025 Poster
- Readers: Everyone
Bayesian Approximation of RNA Folding Times
Dominik Scheuer, Frederic Runge, Jörg K.H. Franke, Michael T. Wolfinger, Christoph Flamm, Frank Hutter
- ICLR 2025 AI4NA Poster
- Readers: Everyone
KinPFN: Bayesian Approximation of RNA Folding Kinetics using Prior-Data Fitted Networks
Dominik Scheuer, Frederic Runge, Jörg K.H. Franke, Michael T. Wolfinger, Christoph Flamm, Frank Hutter
- ICLR 2025 Poster
- Readers: Everyone
RNAinformer: Generative RNA Design with Tertiary Interactions
Sharat Patil, Frederic Runge, Jörg K.H. Franke, Frank Hutter
- Submitted to ICLR 2025
- Readers: Everyone
RNAformer: Axial-Attention For Homology-Aware RNA Secondary Structure Prediction
Jörg K.H. Franke, Frederic Runge, Ryan Koksal, Dominika Matus, Rolf Backofen, Frank Hutter
- Submitted to ICLR 2025
- Readers: Everyone
Towards Generative RNA Design with Tertiary Interactions
Sharat Patil, Frederic Runge, Jörg K.H. Franke, Frank Hutter
- GEM Oral
- Readers: Everyone
RNA-Protein Interaction Classification via Sequence Embeddings
Dominika Matus, Frederic Runge, Jörg K.H. Franke, Lars Gerne, Michael Uhl, Frank Hutter, Rolf Backofen
- GEM Poster
- Readers: Everyone
Probabilistic Transformer: Modelling Ambiguities and Distributions for RNA Folding and Molecule Design
Jörg Franke, Frederic Runge, Frank Hutter
- Published: 31 Oct 2022, Last Modified: 08 Feb 2026
- NeurIPS 2022 Accept
- Readers: Everyone