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Aviv Spinner
Postdoc, The Align Foundation
Joined
September 2022
Names
Aviv Spinner
(Preferred)
,
Han Spinner
,
Hansen Spinner
Emails
****@g.harvard.edu
(Confirmed)
,
****@gmail.com
(Confirmed)
Personal Links
Homepage
Google Scholar
Career & Education History
Postdoc
The Align Foundation
(alignbio.org)
2025
–
Present
PhD student
Harvard University, Harvard University
(g.harvard.edu)
2020
–
2024
Undergrad student
University of California, Berkeley
(berkeley.edu)
2014
–
2018
Advisors, Relations & Conflicts
Coworker
Erika DeBenedictis
2025
–
Present
Coworker
Peter J Kelly
2025
–
Present
PhD Advisor
Debora Marks
2021
–
2024
Expertise
No areas of expertise listed
Publications
Unified sampling framework and benchmarking of sequence- and structure-based protein models
Aviv Spinner
,
Pascal Notin
,
Samuel P Berry
,
Dana Cortade
,
Zach Sisson
,
Svetlana P Ikonomova
,
David Ross
,
Debora Susan Marks
GenBio 2026 Poster
Readers:
Everyone
A Genomic Language Model for Zero-Shot Prediction of Promoter Indel Effects
Courtney A. Shearer
,
Felix Teufel
,
Rose Orenbuch
,
Christian J. Steinmetz
,
Daniel Ritter
,
Erik Xie
,
Artem Gazizov
,
Aviv Spinner
,
Jonathan Frazer
,
Mafalda Dias
,
Pascal Notin
,
Debora Susan Marks
GenBio 2025 Spotlight
Readers:
Everyone
Scaling and Saturation Protein Language Models with Biological Data
Aviv Spinner
,
Erika DeBenedictis
GenBio 2025 Poster
Readers:
Everyone
AI-guided data-scarce engineering of RfxCas13d to create a cell selection tool
Aviv Spinner
,
Ayush Noori
,
Debora Susan Marks
,
George Church
,
Lisa Maria Riedmayr
GEM
Readers:
Everyone
GROQ-seq: A Collaborative, Open Data Approach to Addressing Protein Function Prediction
David Ross
,
Aviv Spinner
,
Simon d'Oelsnitz
,
Svetlana P Ikonomova
,
Olga Vasilyeva
,
Nina Alperovich
,
Kristen Sheldon
,
Courtney Tretheway
,
Dana Cortade
,
Erika DeBenedictis
,
Peter J Kelly
GEM
Readers:
Everyone
A data guided approach to building an ML ready protein expression dataset
Catherine Baranowski
,
Aviv Spinner
,
Peter J Kelly
GEM
Readers:
Everyone
Deep generative modeling of the human proteome reveals over a hundred novel genes involved in rare genetic disorders
Rose Orenbuch
,
Courtney A. Shearer
,
Aaron W Kollasch
,
Aviv Spinner
,
Thomas Hopf
,
Dinko Franceschi
,
Mafalda Dias
,
Jonathan Frazer
,
Debora Susan Marks
archive
Readers:
Everyone
LOL-EVE: Predicting Promoter Variant Effects from Evolutionary Sequences
Courtney A. Shearer
,
Pascal Notin
,
Felix Teufel
,
Rose Orenbuch
,
Daniel Ritter
,
Aviv Spinner
,
Erik Xie
,
Jonathan Frazer
,
Mafalda Dias
,
Debora Susan Marks
ICLR 2025 Conference Withdrawn Submission
Readers:
Everyone
How well do generative protein models generate?
Han Spinner
,
Aaron W Kollasch
,
Debora Susan Marks
GEM Poster
Readers:
Everyone
ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design
Pascal Notin
,
Aaron W Kollasch
,
Daniel Ritter
,
Lood Van Niekerk
,
Steffan Paul
,
Han Spinner
,
Nathan J Rollins
,
Ada Shaw
,
Ruben Weitzman
,
Jonathan Frazer
,
Mafalda Dias
,
Dinko Franceschi
,
Rose Orenbuch
,
Yarin Gal
,
Debora Susan Marks
NeurIPS 2023 Datasets and Benchmarks Poster
Readers:
Everyone
View all 11 publications
Co-Authors
Aaron W Kollasch
Ada Shaw
Artem Gazizov
Ayush Noori
Catherine Baranowski
Christian J. Steinmetz
Colin Hemez
Courtney A. Shearer
Courtney Tretheway
Dana Cortade
Daniel Ritter
David Ross
David Ruchien Liu
Debora Susan Marks
Dinko Franceschi
Erik Xie
Erika DeBenedictis
Felix Teufel
George Church
Jonathan Frazer
Julia McCreary
Kristen Sheldon
Lisa Maria Riedmayr
Lood Van Niekerk
Mafalda Dias
View all 39 co-authors