Paolo Pellizzoni

PhD student, Max-Planck Institute

Joined

January 2023

Names

Paolo Pellizzoni (Preferred)

Emails

****@gmail.com (Confirmed)

****@bsse.ethz.ch (Confirmed)

****@biochem.mpg.de (Confirmed)

Personal Links

Google Scholar

DBLP

Career & Education History

PhD student

Max-Planck Institute (mpg.de)

2023 – 2026

Researcher

ETH Zurich (eth.ch)

2022 – 2023

Advisors, Relations & Conflicts

PhD Advisor

Karsten Borgwardt

2022 – 2025

Expertise

Graph neural networks

Present

Publications

Gelato: Graph Edit Distance via Autoregressive Neural Combinatorial Optimization
Paolo Pellizzoni, Till Hendrik Schulz, Karsten Borgwardt
- ICLR 2026 Poster
- Readers: Everyone
The Flood Complex: Large-Scale Persistent Homology on Millions of Points
Florian Graf, Paolo Pellizzoni, Martin Uray, Stefan Huber, Roland Kwitt
- NeurIPS 2025 poster
- Readers: Everyone
Dimensionality Reduction on Complex Vector Spaces for Euclidean Distance with Dynamic Weights
Simone Moretti, Paolo Pellizzoni, Francesco Silvestri
- ICML 2025 poster
- Readers: Everyone
Graph Neural Networks Can (Often) Count Substructures
Paolo Pellizzoni, Till Hendrik Schulz, Karsten Borgwardt
- ICLR 2025 Spotlight
- Readers: Everyone
Structure- and Function-Aware Substitution Matrices via Differentiable Graph Matching
Paolo Pellizzoni, Carlos Oliver, Karsten Borgwardt
- Differentiable Almost Everything
- Readers: Everyone
On the Expressivity and Sample Complexity of Node-Individualized Graph Neural Networks
Paolo Pellizzoni, Till Hendrik Schulz, Dexiong Chen, Karsten Borgwardt
- NeurIPS 2024 poster
- Readers: Everyone
Endowing Protein Language Models with Structural Knowledge
Dexiong Chen, Philip Hartout, Paolo Pellizzoni, Carlos G. Oliver, Karsten M. Borgwardt
- CoRR 2024
- Readers: Everyone
Structure- and Function-Aware Substitution Matrices via Learnable Graph Matching
Paolo Pellizzoni, Carlos G. Oliver, Karsten M. Borgwardt
- RECOMB 2024
- Readers: Everyone
Endowing Protein Language Models with Structural Knowledge
Dexiong Chen, Philip Hartout, Paolo Pellizzoni, Carlos Oliver, Karsten Borgwardt
- Submitted to ICLR 2024
- Readers: Everyone
Higher-order genetic interaction discovery with network-based biological priors
Paolo Pellizzoni, Giulia Muzio, Karsten M. Borgwardt
- Bioinform. 2023
- Readers: Everyone

View all 17 publications