Sokratis A. Apostolidis

Assistant Professor, University of Pennsylvania, University of Pennsylvania

Joined

September 2024

Names

Sokratis A. Apostolidis (Preferred)

,

Sokratis Apostolidis

Emails

****@pennmedicine.upenn.edu (Confirmed)

Personal Links

Career & Education History

Assistant Professor

University of Pennsylvania, University of Pennsylvania (upenn.edu)

2024 – Present

Advisors, Relations & Conflicts

No relations added

Expertise

No areas of expertise listed

Publications

Interpreting Genomic Language Models using Sparse Autoencoders
Akira A Nair, Jaehyun Joo, Jonghyun Lee, Lina Takemaru, Yidi Huang, Manu Shivakumar, Matthew Eric Lee, Jaesik Kim, Sokratis Apostolidis, Dokyoon Kim
- Mech Interp Workshop ICML 2026 viafasttrackPoster
- Readers: Everyone
Interpreting Genomic Language Models using Sparse Autoencoders
Akira A Nair, Jaehyun Joo, Jonghyun Lee, Lina Takemaru, Yidi Huang, Manu Shivakumar, Matthew Eric Lee, Jaesik Kim, Sokratis Apostolidis, Dokyoon Kim
- ICML 2026 regular
- Readers: Everyone
MAESTRO: Masked Encoding Set Transformer with Self-Distillation
Matthew Eric Lee, Jaesik Kim, Matei Ionita, Jonghyun Lee, Michelle L. McKeague, YONGHYUN NAM, Irene Khavin, Yidi Huang, Victoria Fang, Sokratis Apostolidis, Divij Mathew, Shwetank, Ajinkya Pattekar, Zahabia Rangwala, Amit Bar-Or, Benjamin A Fensterheim, Benjamin A. Abramoff, Rennie L. Rhee, Damian Maseda, Allison R Greenplate et al. (2 additional authors not shown)
- ICLR 2025 Poster
- Readers: Everyone

Co-Authors