Tony Shen

PhD student, Broad Institute

PhD student, Simon Fraser University

Joined

March 2022

Names

Tony Shen (Preferred)

Emails

****@sfu.ca (Confirmed)

Personal Links

Homepage

Google Scholar

Career & Education History

PhD student

Broad Institute (broadinstitute.org)

2025 – 2026

PhD student

Simon Fraser University (sfu.ca)

2023 – 2026

Advisors, Relations & Conflicts

PhD Advisor

Wengong Jin

2025 – Present

PhD Advisor

Martin Ester

2023 – Present

Expertise

No areas of expertise listed

Publications

Accelerating Scientific Discovery with Autonomous Goal-evolving Agents
Yuanqi Du, Botao Yu, Tianyu Liu, Tony Shen, Junwu Chen, Jan G. Rittig, Kunyang Sun, Yikun Zhang, Cassandra Masschelein, Yingze Wang, Haorui Wang, Haojun Jia, Chao Zhang, Hongyu Zhao, Martin Ester, Teresa Head-Gordon, Carla P Gomes, Huan Sun, Chenru Duan, Philippe Schwaller et al. (1 additional authors not shown)
- P-AGI
- Readers: Everyone
Accelerating Scientific Discovery with Autonomous Goal-evolving Agents
Yuanqi Du, Botao Yu, Tianyu Liu, Tony Shen, Junwu Chen, Jan G. Rittig, Kunyang Sun, Yikun Zhang, Cassandra Masschelein, Yingze Wang, Haorui Wang, Haojun Jia, Chao Zhang, Hongyu Zhao, Martin Ester, Teresa Head-Gordon, Carla P Gomes, Huan Sun, Chenru Duan, Philippe Schwaller et al. (1 additional authors not shown)
- Gen² 2026 Poster
- Readers: Everyone
Accelerating Scientific Discovery with Autonomous Goal-evolving Agents
Yuanqi Du, Botao Yu, Tianyu Liu, Tony Shen, Junwu Chen, Jan G. Rittig, Kunyang Sun, Yikun Zhang, Cassandra Masschelein, Yingze Wang, Haorui Wang, Haojun Jia, Chao Zhang, Hongyu Zhao, Martin Ester, Teresa Head-Gordon, Carla P Gomes, Huan Sun, Chenru Duan, Philippe Schwaller et al. (1 additional authors not shown)
- GEM 2026
- Readers: Everyone
Compositional Flows for 3D Molecule and Synthesis Pathway Co-design
Tony Shen, Seonghwan Seo, Ross Irwin, Kieran Didi, Simon Olsson, Woo Youn Kim, Martin Ester
- GEM
- Readers: Everyone
Compositional Flows for 3D Molecule and Synthesis Pathway Co-design
Tony Shen, Seonghwan Seo, Ross Irwin, Kieran Didi, Simon Olsson, Woo Youn Kim, Martin Ester
- AI4MAT-ICLR-2025 Spotlight
- Readers: Everyone
Compositional Flows for 3D Molecule and Synthesis Pathway Co-design
Tony Shen, Seonghwan Seo, Ross Irwin, Kieran Didi, Simon Olsson, Woo Youn Kim, Martin Ester
- ICML 2025 poster
- Readers: Everyone
Generative Flows on Synthetic Pathway for Drug Design
Seonghwan Seo, Minsu Kim, Tony Shen, Martin Ester, Jinkyoo Park, Sungsoo Ahn, Woo Youn Kim
- AIDrugX Poster
- Readers: Everyone
Generative Flows on Synthetic Pathway for Drug Design
Seonghwan Seo, Minsu Kim, Tony Shen, Martin Ester, Jinkyoo Park, Sungsoo Ahn, Woo Youn Kim
- ICLR 2025 Poster
- Readers: Everyone
TacoGFN: Target-conditioned GFlowNet for Structure-based Drug Design
Tony Shen, Seonghwan Seo, Grayson Lee, Mohit Pandey, Jason R Smith, Artem Cherkasov, Woo Youn Kim, Martin Ester
- Accepted by TMLR
- Readers: Everyone
TacoGFN: Target Conditioned GFlowNet for Drug Design
Tony Shen, Mohit Pandey, Jason Smith, Artem Cherkasov, Martin Ester
- AI4D3 2023 Poster
- Readers: Everyone

View all 11 publications

Co-Authors

View all 33 co-authors