Veniamin Fishman

Principal Researcher, Institute of Cytology and Genetics

Joined

February 2024

Names

Veniamin Fishman (Preferred)

Emails

****@airi.net (Confirmed)

****@gmail.com (Confirmed)

****@bionet.nsc.ru (Confirmed)

Personal Links

ORCID

Career & Education History

Principal Researcher

Institute of Cytology and Genetics (bionet.nsc.ru)

2010 – Present

Researcher

AIRI (airi.net)

2021 – 2024

Advisors, Relations & Conflicts

PhD Advisor

Oleg Serov

2010 – 2015

Expertise

Genomics

2014 – 2025

Publications

Modern Gene Finders: ab initio gene discovery benchmark with DNA language models
Aleksei Shmelev, Artem Shadskiy, Yuri Kuratov, Mikhail Burtsev, Olga Kardymon, Veniamin Fishman
- Gen² 2026 Poster
- Readers: Everyone
Modern Gene Finders: ab initio gene discovery benchmark with DNA language models
Aleksei Shmelev, Artem Shadskiy, Yuri Kuratov, Mikhail Burtsev, Olga Kardymon, Veniamin Fishman
- MLGenX 2026 Poster
- Readers: Everyone
Back to BERT in 2026: ModernGENA as a Strong, Efficient Baseline for DNA Foundation Models
Alena Aspidova, Yuri Kuratov, Artem Shadskiy, Mikhail Burtsev, Veniamin Fishman
- Gen² 2026 Poster
- Readers: Everyone
Back to BERT in 2026: ModernGENA as a Strong, Efficient Baseline for DNA Foundation Models
Alena Aspidova, Yuri Kuratov, Artem Shadskiy, Mikhail Burtsev, Veniamin Fishman
- ICLR 2026 Workshop FM4Science Poster
- Readers: Everyone
Back to BERT in 2026: ModernGENA as a Strong, Efficient Baseline for DNA Foundation Models
Alena Aspidova, Yuri Kuratov, Artem Shadskiy, Mikhail Burtsev, Veniamin Fishman
- MLGenX 2026 Tinypapertrack
- Readers: Everyone
GENATATORs: ab initio Gene Annotation With DNA Language Models
Aleksei Shmelev, Artem Shadskiy, Yuri Kuratov, Mikhail Burtsev, Olga Kardymon, Veniamin Fishman
- Submitted to ICLR 2026
- Readers: Everyone
Searching for Phenotypic Needles in Genomic Haystacks: DNA Language Models for Sex Prediction
Alla Chepurova, Yuri Kuratov, Polina Belokopytova, Mikhail Burtsev, Veniamin Fishman
- MLGenX 2025 TinyPapers
- Readers: Everyone
GENATATOR: de novo Gene Annotation With DNA Language Model
Aleksei Shmelev, Artem Shadskiy, Yuri Kuratov, Mikhail Burtsev, Olga Kardymon, Veniamin Fishman
- MLGenX 2025
- Readers: Everyone
GENATATOR: de novo Gene Annotation With DNA Language Model
Aleksei Shmelev, Artem Shadskiy, Yuri Kuratov, Mikhail Burtsev, Olga Kardymon, Veniamin Fishman
- ICLR 2025 AI4NA Poster
- Readers: Everyone
Recurrent memory augmentation of GENA-LM improves performance on long DNA sequence tasks
Yuri Kuratov, Aleksei Shmelev, Veniamin Fishman, Olga Kardymon, Mikhail Burtsev
- MLGenX 2024 Poster
- Readers: Everyone