Xingyi Cheng

Joined

May 2022

Names

Xingyi Cheng (Preferred)

Emails

****@gmail.com (Confirmed)

****@genbio.ai (Confirmed)

****@mbzuai.ac.ae (Confirmed)

Personal Links

Google Scholar

DBLP

Semantic Scholar

Career & Education History

Principal Researcher

BioMap (biomap.com)

2022 – 2024

Principal Engineer

Tencent (tencent.com)

2021 – 2022

Researcher

AntGroup (antgroup.com)

2017 – 2021

Researcher

Baidu (baidu.com)

2014 – 2017

Researcher

Alibaba (alibaba-inc.com)

2012 – 2014

Advisors, Relations & Conflicts

No relations added

Expertise

No areas of expertise listed

Publications

Spatial Cell-Guided Pretraining for Scalable Spatial Transcriptomics Foundation Model
Jing Gong, Yixuan Wang, Nicholas Ho, Xingyi Cheng, Le Song, Eric P. Xing
- GenBio 2025 Poster
- Readers: Everyone
Retrieval Augmented Protein Language Models for Protein Structure Prediction
Pan Li, Xingyi Cheng, Le Song, Eric P. Xing
- GenBio 2025 Spotlight
- Readers: Everyone
Protein Inverse Folding From Structure Feedback
Junde Xu, Zijun Gao, Xinyi Zhou, hujie, Xingyi Cheng, Le Song, Guangyong Chen, Pheng-Ann Heng, Jiezhong Qiu
- NeurIPS 2025 poster
- Readers: Everyone
Mixture of Experts Enable Efficient and Effective Protein Understanding and Design
Ning Sun, Shuxian Zou, Tianhua Tao, Sazan Mahbub, Dian Li, Yonghao Zhuang, Hongyi Wang, Xingyi Cheng, Le Song, Eric P. Xing
- AIDrugX Spotlight
- Readers: Everyone
Scaling Dense Representations for Single Cell Gene Expression with Transcriptome-Scale Context
Nicholas Ho, Caleb Ellington, Jinyu Hou, Sohan Addagudi, Shentong Mo, Tianhua Tao, Dian Li, Yonghao Zhuang, Hongyi Wang, Xingyi Cheng, Le Song, Eric P. Xing
- AIDrugX Poster
- Readers: Everyone
Training Compute-Optimal Protein Language Models
Xingyi Cheng, Bo Chen, Pan Li, Jing Gong, Jie Tang, Le Song
- AccMLBio Spotlight
- Readers: Everyone
MSAGPT: Neural Prompting Protein Structure Prediction via MSA Generative Pre-Training
Bo Chen, Zhilei Bei, Xingyi Cheng, Pan Li, Jie Tang, Le Song
- ICML2024-AI4Science Poster
- Readers: Everyone
Training Compute-Optimal Protein Language Models
Xingyi Cheng, Bo Chen, Pan Li, Jing Gong, Jie Tang, Le Song
- ICML2024-AI4Science Spotlight
- Readers: Everyone
MSAGPT: Neural Prompting Protein Structure Prediction via MSA Generative Pre-Training
Bo Chen, Zhilei Bei, Xingyi Cheng, Pan Li, Jie Tang, Le Song
- NeurIPS 2024 poster
- Readers: Everyone
Training Compute-Optimal Protein Language Models
Xingyi Cheng, Bo Chen, Pan Li, Jing Gong, Jie Tang, Le Song
- NeurIPS 2024 spotlight
- Readers: Everyone

View all 35 publications

Co-Authors

View all 73 co-authors