Yinkai Wang

PhD student, Tufts University

Joined

October 2021

Names

Yinkai Wang (Preferred)

Emails

****@gmu.edu (Confirmed)

****@tufts.edu (Confirmed)

Personal Links

Career & Education History

PhD student

Tufts University (tufts.edu)

2022 – 2027

Undergrad student

George Mason University (gmu.edu)

2018 – 2022

Advisors, Relations & Conflicts

PhD Advisor

Soha Hassoun

2022 – 2029

Expertise

NLP

Present

Bioinformatics

Present

Publications

GRAPH GENERATIVE PRE-TRAINED TRANSFORMER
Xiaohui Chen, Yinkai Wang, Jiaxing He, Yuanqi Du, Soha Hassoun, Xiaolin Xu, Liping Liu
- ICLR 2025 DeLTa Workshop Poster
- Readers: Everyone
Large Language Model is Secretly a Protein Sequence Optimizer
Yinkai Wang, Jiaxing He, Yuanqi Du, Xiaohui Chen, Jianan Canal Li, Liping Liu, Xiaolin Xu, Soha Hassoun
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Graph Generative Pre-trained Transformer
Xiaohui Chen, Yinkai Wang, Jiaxing He, Yuanqi Du, Soha Hassoun, Xiaolin Xu, Liping Liu
- ICML 2025 poster
- Readers: Everyone
MADGEN: Mass-Spec attends to De Novo Molecular generation
Yinkai Wang, Xiaohui Chen, Liping Liu, Soha Hassoun
- ICLR 2025 Poster
- Readers: Everyone
On Separate Normalization in Self-supervised Transformers
Xiaohui Chen, Yinkai Wang, Yuanqi Du, Soha Hassoun, Liping Liu
- NeurIPS 2023 poster
- Readers: Everyone
A Survey on Deep Graph Generation: Methods and Applications
Yanqiao Zhu, Yuanqi Du, Yinkai Wang, Yichen Xu, Jieyu Zhang, Qiang Liu, Shu Wu
- Published: 24 Nov 2022, Last Modified: 05 May 2023
- LoG 2022 Poster
- Readers: Everyone
Multi-objective Deep Data Generation with Correlated Property Control
Shiyu Wang, Xiaojie Guo, Xuanyang Lin, Bo Pan, Yuanqi Du, Yinkai Wang, Yanfang Ye, Ashley Ann Petersen, Austin Leitgeb, Saleh AlKhalifa, Kevin Minbiole, William Wuest, Amarda Shehu, Liang Zhao
- Published: 31 Oct 2022, Last Modified: 08 Feb 2026
- NeurIPS 2022 Accept
- Readers: Everyone
A Survey on Deep Graph Generation: Methods and Applications
Yanqiao Zhu, Yuanqi Du, Yinkai Wang, Jieyu Zhang, Qiang Liu, Shu Wu
- 16 May 2022
- OpenReview Archive Direct Upload
- Readers: Everyone
Small Molecule Generation via Disentangled Representation Learning
Yuanqi Du, Xiaojie Guo, Yinkai Wang, Amarda Shehu, Liang Zhao
- 16 May 2022
- OpenReview Archive Direct Upload
- Readers: Everyone
A Survey on Deep Graph Generation: Methods and Applications
Yanqiao Zhu, Yuanqi Du, Yinkai Wang, Yichen Xu, Jieyu Zhang, Qiang Liu, Shu Wu
- 2022 (modified: 31 Mar 2022)
- CoRR 2022
- Readers: Everyone

View all 20 publications

Co-Authors

View all 34 co-authors