Yuedong Yang

Full Professor, School of Computer Science and Engineering, SUN YAT-SEN UNIVERSITY

Joined

May 2021

Names

Yuedong Yang (Preferred)

Yang Yuedong

Emails

****@mail.sysu.edu.cn (Confirmed)

Personal Links

Career & Education History

Full Professor

School of Computer Science and Engineering, SUN YAT-SEN UNIVERSITY (sysu.edu.cn)

2017 – Present

Principal Researcher

Griffith University (griffith.edu.au)

2013 – 2017

Researcher

Indiana University Purdue University Indianapolis (iupui.edu)

2006 – 2013

Advisors, Relations & Conflicts

PhD Advisor

Haiyan Liu

2000 – 2006

Expertise

bioinformatics

2000 – Present

Publications

A self-supervised electrocardiogram foundation model for empowering cardiovascular disease prediction and genetic factor discovery
Siying Lin, Zhaoqi Li, Qifan Wu, Yifeng Chen, Yuedong Yang, Huiying Zhao
- Nature Communications
- Readers: Everyone
TripKa: Accurate and Scalable Acid–Base Dissociation Property Prediction via Triplet Interaction Networks and Physical Knowledge
Wentao Wei, Jiahua Rao, Bai Xue, Jiancong Xie, Dahao Xu, Xichen Sun, Yutong Lu, Yu Wang, Mingjun Yang, Yuedong Yang
- Journal of Chemical Information and Modeling
- Readers: Everyone
Accurate protein-protein interactions modeling through physics-informed geometric invariant learning
Jiahua Rao, Deqin Liu, Xiaolong Zhou, Qianmu Yuan, Wentao Wei, Wei Lu, Jixian Zhang, Yu Rong, Yuedong Yang, Shuangjia Zheng
- Communications Biology
- Readers: Everyone
GeoPMB: An Interface-Aware Geometric Deep Learning Framework for Peptide-MHCI Binding Prediction with Evolutionary Insight
Xiaoyu Chen, Leyu Chen, Mingming Zhu, Qianmu Yuan, Yuedong Yang
- Journal of Chemical Information and Modeling
- Readers: Everyone
Comprehensive single-cell RNA-seq analysis using deep interpretable generative modeling guided by biological hierarchy knowledge
Hegang Chen, Yuyin Lu, Zhiming Dai, Yuedong Yang, Qing Li, Yanghui Rao
- Briefings in Bioinformatics
- Readers: Everyone
Prediction of nucleic acid binding residues in protein sequences: Recent advances and future prospects
Sushmita Basu, Yuedong Yang, Lukasz Kurgan
- Current Opinion in Structural Biology
- Readers: Everyone
A Meta-learning based Graph-Hierarchical Clustering Method for Single Cell RNA-Seq Data
Zixiang Pan, Yuefan Lin, Haokun Zhang, Yuansong Zeng, Weijiang Yu, Yuedong Yang
- Ieee International Conference on Bioinformatics and Biomedicine, Bibm
- Readers: Everyone
A synergistic generative-ranking framework for tailored design of therapeutic single-domain antibodies
Yu Kong, Jiale Shi, Fandi Wu, Ting Zhao, Rubo Wang, Xiaoyi Zhu, Qingyuan Xu, Yidong Song, Quanxiao Li, Yulu Wang, Xingyu Gao, Yuedong Yang, Yi Feng, Zifei Wang, Weifeng Ge, Yanling Wu, Zhenlin Yang, Jianhua Yao, Tianlei Ying
- Cell Discovery
- Readers: Everyone
Interpretable Drug Response Prediction through Molecule Structure-aware and Knowledge-Guided Visible Neural Network
Jiancong Xie, Zhe Zhang, Youyou Li, Jiahua Rao, Yuedong Yang
- IEEE International Conference on Bioinformatics and Biomedicine (BIBM)
- Readers: Everyone
Multi-modal Contrastive Learning with Negative Sampling Calibration for Phenotypic Drug Discovery
Jiahua Rao, Hanjing Lin, Leyu Chen, Jiancong Xie, Shuangjia Zheng, Yuedong Yang
- Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition
- Readers: Everyone

View all 239 publications

Co-Authors

View all 810 co-authors