MICCAI 2024 Workshop COMPAYL Submissions

Stromal Tissue Segmentation in Multi-Stained Serial Histopathological Sections of Pancreatic Tumors
David Montalvo-García, Juan E. Ortuño, Ana D. Ramos-Guerra, Sofía Granados-Aparici, Subhra S. Goswami, Pablo Santiago Diaz, Maria Evangelina Patriarca, Joan Llop Gros, Lidia Estudillo, Mar Iglesias Coma, Rosa Noguera, Nuria Malats, Maria J Ledesma Carbayo
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Upscaling Prostate Cancer MRI Images to Cell-level Resolution Using Self-supervised Learning
Yaying Shi, Srijan Das, Yonghong Yan
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Scoring Tumor-Infiltrating Lymphocytes in breast DCIS: A guideline-driven artificial intelligence approach
Matteo Pozzi, Natalie Klubickova, Michela Campora, Frederique Meeuwsen, Joey Spronck, Carlijn Lems, Michelle Stegeman, Leslie Tessier, Mattia Barbareschi, Jeroen van der Laak, Giuseppe Jurman, Francesco Ciompi
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Histopathobiome – integrating histopathology and microbiome data via multimodal deep learning
Agata Polejowska, Annemarie Boleij, Francesco Ciompi
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Early Fusion of H&E and IHC Histology Images for Pediatric Brain Tumor Classification
Christoforos Spyretos, Iulian Emil Tampu, Nadieh Khalili, Juan Manuel Pardo Ladino, Per Nyman, Ida Blystad, Anders Eklund, Neda Haj-Hosseini
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
StairwayToStain: A Gradual Stain Translation Approach for Glomeruli Segmentation
Ali Alhaj Abdo, Islem Mhiri, Zeeshan Nisar, Barbara Seeliger, Thomas Lampert
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Prediction of KRAS mutation status from H&E foundation model embeddings in non-small cell lung cancer
Marc Robbins, Jessica Loo, Saurabh Vyawahare, Yang Wang, Carson Mcneil, Sudha Rao, Pok Fai Wong, Ehud Rivlin, Shamira Weaver, Roman Goldenberg
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
CARMIL: Context-Aware Regularization on Multiple Instance Learning models for Whole Slide Images
Thiziri Nait Saada, Valentina Di-Proietto, Katharina Von Loga, Benoit Schmauch, Lucas Fidon
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Multi-scale Whole Slide Image Assessment Improves Deep Learning based WHO 2021 Glioma Classification
Shubham Innani, MacLean Nasrallah, W. Robert Bell, Bhakti Baheti, Spyridon Bakas
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
SurvivMIL: A Multimodal, Multiple Instance Learning Pipeline for Survival Outcome of Neuroblastoma Patients
Reed Naidoo, Olga Fourkioti, Matt De Vries, Chris Bakal
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
ContriMix: Scalable stain color augmentation for domain generalization without domain labels in digital pathology
Tan H Nguyen, Dinkar Juyal, Jin Li, Aaditya Prakash, Shima Nofallah, Chintan Shah, Sai Chowdary Gullapally, Limin Yu, Michael Griffin, Anand Sampat, John Abel, Justin Lee, Amaro Taylor-Weiner
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Deep-Learning Based Virtual Stain Multiplexing Immunohistochemistry Slides – a Pilot Study
Oded Ben-David, Elad Arbel, Sarit Aviel-Ronen, Frederik Heurlin Aidt, Kristopher Kersch, Tine Hagedorn Olsen, Daniela Rabkin, Itay Remer, Amir Ben-Dor, Lars Jacobsen, Anya Tsalenko
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
PathAlign: A vision--language model for whole slide images in histopathology
Faruk Ahmed, Andrew Sellergren, Lin Yang, Jinhua Xu, Boris Babenko, Abbi Ward, Niels Olson, Arash Mohtashamian, Yossi Matias, Greg Corrado, Quang Duong, Dale R. Webster, SHRAVYA SHETTY, Daniel Golden, Yun Liu, David F. Steiner, Ellery Wulczyn
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Preprocessing Pathology Reports for Vision-Language Model Development
Ruben Lucassen, Tijn van de Luijtgaarden, Sander Moonemans, Willeke Blokx, Mitko Veta
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
CDNet: Causal Inference inspired Diversified Aggregation Convolution for Pathology Image Segmentation
Dawei Fan, YiFang Gao, Jiaming Yu, Changcai Yang, RIQING CHEN, Lifang Wei
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Benchmarking Embedding Aggregation Methods in Computational Pathology: A Clinical Data Perspective
Shengjia Chen, Gabriele Campanella, Abdulkadir Elmas, Aryeh Stock, Jennifer Zeng, Alexandros D. Polydorides, Adam J. Schoenfeld, Kuan-lin Huang, Jane Houldsworth, Chad Vanderbilt, Thomas J. Fuchs
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
WSI-SAM: Multi-resolution Segment Anything Model (SAM) for histopathology whole-slide images
Hong Liu, Haosen Yang, Paul J. van Diest, Josien P.W. Pluim, Mitko Veta
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Lymphocytes subtyping on H&E slides with automatic labelling through same-tissue stained ImmunoFluorescence images
Etienne Pochet, Luis Cano Ayestas, Qi Tang, Roger Trullo
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone
Multi-head Attention-based Deep Multiple Instance Learning
Hassan Keshvarikhojasteh, Josien P.W. Pluim, Mitko Veta
- Published: 16 Jul 2024, Last Modified: 16 Jul 2024
- COMPAYL 2024
- Readers: Everyone