Endo-SemiS: Towards Robust Semi-supervised Image Segmentation for Endoscopic Video

Hao Li, Daiwei Lu, Xing Yao, Nicholas Kavoussi, Ipek Oguz

Keywords: Comprehensive supervision, uncertainty-guided pseudo-label, spatiotemporal

Abstract: In this paper, we present Endo-SemiS, a semi-supervised segmentation framework for providing reliable segmentation of endoscopic video frames with limited annotation. Endo-SemiS uses 4 strategies to improve performance by effectively utilizing all available data, particularly unlabeled data: (1) Cross-supervision between two individual networks that supervise each other; (2) Uncertainty-guided pseudo-labels from unlabeled data, which are generated by selecting high-confidence regions to improve their quality; (3) Joint pseudo-label supervision, which aggregates reliable pixels from the pseudo-labels of both networks to provide accurate supervision for unlabeled data; and (4) Mutual learning, where both networks learn from each other at the feature and image levels, reducing variance and guiding them toward a consistent solution. Additionally, a separate corrective network that utilizes spatiotemporal information from endoscopy video to improve segmentation performance. Endo-SemiS is evaluated on two clinical applications: kidney stone laser lithotomy from ureteroscopy and polyp screening from colonoscopy. Compared to state-of-the-art segmentation methods, Endo-SemiS substantially achieves superior results on both datasets with limited labeled data. The code is publicly available at https://github.com/MedICL-VU/Endo-SemiS

Primary Subject Area: Learning with Noisy Labels and Limited Data

Secondary Subject Area: Segmentation

Registration Requirement: Yes

Reproducibility: https://github.com/MedICL-VU/Endo-SemiS

Read CFP & Author Instructions: Yes

Originality Policy: Yes

Single-blind & Not Under Review Elsewhere: Yes

LLM Policy: Yes

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Submission Number: 130