MSDataStream - Connecting a Bruker Mass Spectrometer to the Internet

Roman Zoun, Kay Schallert, David Broneske, Wolfram Fenske, Marcus Pinnecke, Robert Heyer, Sven Brehmer, Dirk Benndorf, Gunter Saake

Abstract: Metaproteomics is the biological research of proteins of whole communities comprised of thousands of species using tandem mass spectrometry. But still it follows a sequential non parallelizable workflow. Hence, researchers have to wait for hours or even days until the measurement data are available. In our demo, we show a way to decrease the smallest unit of the workflow to a minimum to realize a near real time stream processing system on a fast data architecture.