A high-throughput, online tool for investigating host-pathogen macromolecular interactions buried in scientific literature

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Tuan-Dung Le, Phuong D. Nguyen, Dmitry Korkin, Thanh Thieu

Published: 2021, Last Modified: 27 May 2026CHASE 2021EveryoneRevisionsBibTeXCC BY-SA 4.0
Abstract: This work introduces a low-latency, searchable web tool for biologist and healthcare researchers to quickly explore a large number of host-pathogen interactions (HPI) reported in scientific publication. Our database contains 23,581 generic HPI and 257 COVID-19 related HPI extracted from 32 million PubMed abstracts. The data was automatically collected by running our high-precision biomedical text mining system, which consumes much less effort than manual curation while still provides reliable output. Web URL: philm2web.live