MAGNETO: Cell type marker panel generator from single-cell transcriptomic data

Andrea Tangherloni, Simone G. Riva, Brynelle Myers, Francesca M. Buffa, Paolo Cazzaniga

Abstract: Highlights•MAGNETO is a fully automated framework to build CD marker panels from scRNA-Seq data.•MAGNETO exploits multi-objective optimization algorithms to solve the problem.•MAGNETO outperform the state-of-the-art approaches on three public scRNA-Seq datasets.•MAGNETO can build marker panels with different specificity levels and number of genes.