TAVAE: A VAE with Adaptable Priors Explains Contextual Modulation in the Visual Cortex

ICLR 2026 Conference Submission20653 Authors

Keywords: VAE, generative models, biological vision, neuroscience

TL;DR: We introduce a data-efficient way to adapt VAE priors, allowing us to explain both passive viewing and task-driven neuronal activity in mouse visual cortex.

Abstract:

The brain interprets visual information through learned regularities, a computation formalized as performing probabilistic inference under a prior. The visual cortex establishes priors for this inference,
some of which are delivered through widely established top-down connections that inform low-level cortices about statistics represented at higher levels in the cortical hierarchy.
While evidence supports that adaptation leads to priors reflecting the structure of natural images, it remains unclear if similar priors can be flexibly acquired when learning a specific task.
To investigate this, we built a generative model of V1 that we optimized for performing a simple discrimination task and analyzed it along with large scale recordings from mice performing an analogous task.
In line with recent successful approaches, we assumed that neuronal activity in V1 can be identified with latent posteriors in the generative model, providing an opportunity to investigate the contributions of task-related priors to neuronal responses. To obtain a flexible test bed for this analysis, we extended the VAE formalism so that a task can be flexibly and data-efficiently acquired by reusing previously learned representations.
Task-specific priors learned by this Task-Amortized VAE were used to investigate biases in mice and model when presenting stimuli that violated the trained task statistics.
Mismatch between learned task statistics and incoming sensory evidence showed signatures of uncertainty in stimulus category in the posterior of TAVAE, reflecting properties of bimodal response profile in V1 recordings.
The task-optimized generative model could account for various characteristics of V1 population activity, including within-day updates to the population responses. Our results confirm that flexible task-specific contextual priors can be learned on-demand by the visual system and can be deployed as early as the entry level of the visual cortex.

Primary Area: applications to neuroscience & cognitive science

Submission Number: 20653