On the sample complexity of conditional independence testing with Von Mises estimator with application to causal discovery
Abstract: Motivated by conditional independence testing, an essential step in constraint-based causal discovery algorithms, we study the nonparametric Von Mises estimator for the entropy of multivariate distributions built on a kernel density estimator. We establish an exponential concentration inequality for this estimator. We design a test for conditional independence (CI) based on our estimator, called VM-CI, which achieves optimal parametric rates under smoothness assumptions. Leveraging the exponential concentration, we prove a tight upper bound for the overall error of VM-CI. This, in turn, allows us to characterize the sample complexity of any constraint-based causal discovery algorithm that uses VM-CI for CI tests. To the best of our knowledge, this is the first sample complexity guarantee for causal discovery for non-linear models and non-Gaussian continuous variables. Furthermore, we empirically show that VM-CI outperforms other popular CI tests in terms of either time, sample complexity, or both. This enhancement significantly improves the performance in structure learning as well.
Submission Number: 4161
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