AtlasODE: Learning Continuous Atlases via Neural Ordinary Differential Equations

Published: 09 May 2026, Last Modified: 12 May 2026MIDL 2026 - Short Papers PosterEveryoneRevisionsBibTeXCC BY 4.0
Keywords: Anatomical atlas, Brain template, Neural ODE, Aging and disease evolution
TL;DR: AtlasODE reframes brain anatomical atlas generation as continuous-time integration, capturing the morphological manifold while providing an interpretable mechanism to adaptively model disease evolution.
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Abstract: Current approaches to brain atlas generation rely on independent static fitting, inherently failing to capture continuous morphological evolution. To address this gap, we propose AtlasODE, a novel framework leveraging Neural Ordinary Differential Equations to reframe atlas generation as a continuous-time integration process. To explicitly model neurodegeneration, our Pathological Trajectory Modulator (PTM) formulates disease as an adaptive perturbation, characterizing pathological evolution as a divergence from the normative aging trajectory. Experimental results on synthetic toy data and brain MRI data demonstrate the superior performance of AtlasODE.
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Submission Number: 30
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