Watermarking Graph Neural Networks via Explanations for Ownership Protection

ICLR 2026 Conference Submission18980 Authors

Keywords: Watermarking, GNNs, Ownership, Verification, Ownership Verification, Explanation, Graph

Abstract: Graph Neural Networks (GNNs) are widely deployed in industry, making their intellectual property valuable. However, protecting GNNs from unauthorized use remains a challenge. Watermarking offers a solution by embedding ownership information into models. Existing watermarking methods have two limitations: First, they rarely focus on graph data or GNNs. Second, the \emph{de facto} backdoor-based method relies on manipulating training data, which can introduce ownership ambiguity through misclassification and vulnerability to data poisoning attacks that can interrupt the backdoor mechanism. Our explanation-based watermarking inherits the strengths of backdoor-based methods (e.g., black-box verification) without data manipulation, eliminating ownership ambiguity and data dependencies. In particular, we watermark GNN explanations such that these explanations are statistically distinct from others, so ownership claims must be verified through statistical significance. We theoretically prove that, even with full knowledge of our method, locating the watermark is NP-hard. Empirically, our method demonstrates robustness to fine-tuning and pruning attacks. By addressing these challenges, our approach significantly advances GNN intellectual property protection.

Primary Area: alignment, fairness, safety, privacy, and societal considerations

Submission Number: 18980