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Jakub R. Kaczmarzyk
Joined
July 2019
Names
Jakub R. Kaczmarzyk
(Preferred)
,
Jakub Kaczmarzyk
,
Jakub Roman Kaczmarzyk
Emails
****@gmail.com
(Confirmed)
,
****@cshl.edu
(Confirmed)
,
****@stonybrookmedicine.edu
(Confirmed)
Personal Links
Homepage
Google Scholar
DBLP
ORCID
LinkedIn
Semantic Scholar
Career & Education History
PhD student
Academic medical center at State University of New York at Stony Brook
(stonybrookmedicine.edu)
2021
–
2025
Researcher
Massachusetts Institute of Technology
(mit.edu)
2016
–
2019
Undergrad student
Union College
(union.edu)
2012
–
2016
Advisors, Relations & Conflicts
PhD Advisor
Joel H. Saltz
2021
–
2025
PhD Advisor
Peter Koo
2021
–
2025
Expertise
deep learning
,
medical imaging
,
histopathology
2018
–
Present
Publications
Explainable AI for computational pathology identifies model limitations and tissue biomarkers
Jakub R. Kaczmarzyk
,
Joel Saltz
,
Peter K Koo
GenAI4Health Poster
Readers:
Everyone
A Novel Framework for Characterization of Tumor-Immune Spatial Relationships in Tumor Microenvironment
Mahmudul Hasan
,
Jakub R. Kaczmarzyk
,
David Paredes
,
Lyanne Oblein
,
Jaymie Oentoro
,
Shahira Abousamra
,
Michael Horowitz
,
Dimitris Samaras
,
Chao Chen
,
Tahsin M. Kurç
,
Kenneth R. Shroyer
,
Joel H. Saltz
2022 (modified: 10 Jun 2022)
CoRR 2022
Readers:
Everyone
Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging
David N. Kennedy
,
Sanu A. Abraham
,
Julianna F. Bates
,
Albert Crowley
,
Satrajit S. Ghosh
,
Tom Gillespie
,
Mathias Goncalves
,
Jeffrey S. Grethe
,
Yaroslav O. Halchenko
,
Michael Hanke
,
Christian Haselgrove
,
Steven M. Hodge
,
Dorota Jarecka
,
Jakub Kaczmarzyk
,
David B. Keator
,
Kyle Meyer
,
Maryann E. Martone
,
Smruti Padhy
,
Jean-Baptiste Poline
,
Nina Preuss
et al. (2 additional authors not shown)
2019 (modified: 10 Jun 2022)
Frontiers Neuroinformatics 2019
Readers:
Everyone
Knowing What You Know in Brain Segmentation Using Bayesian Deep Neural Networks
Patrick McClure
,
Nao Rho
,
John A. Lee
,
Jakub R. Kaczmarzyk
,
Charles Y. Zheng
,
Satrajit S. Ghosh
,
Dylan Nielson
,
Adam G. Thomas
,
Peter A. Bandettini
,
Francisco Pereira
2019 (modified: 10 Jun 2022)
Frontiers Neuroinformatics 2019
Readers:
Everyone
Distributed Weight Consolidation: A Brain Segmentation Case Study
Patrick McClure
,
Charles Y. Zheng
,
Jakub Kaczmarzyk
,
John Rogers-Lee
,
Satrajit S. Ghosh
,
Dylan Nielson
,
Peter A. Bandettini
,
Francisco Pereira
2018 (modified: 11 Nov 2022)
NeurIPS 2018
Readers:
Everyone
Co-Authors
Adam G. Thomas
Albert Crowley
Chao Chen
Charles Y. Zheng
Christian Haselgrove
David B. Keator
David N. Kennedy
David Paredes
Dimitris Samaras
Dorota Jarecka
Dylan Nielson
Francisco Pereira
Jaymie Oentoro
Jean-Baptiste Poline
Jeffrey S. Grethe
Joel H. Saltz
Joel Saltz
John A. Lee
John Rogers-Lee
Julianna F. Bates
Kenneth R. Shroyer
Kyle Meyer
Lyanne Oblein
Mahmudul Hasan
Maryann E. Martone
View all 43 co-authors