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Jeffrey J Nirschl
Assistant Professor, Pathology, University of Wisconsin - Madison
Joined
February 2021
Names
Jeffrey J Nirschl
(Preferred)
,
Jeffrey J. Nirschl
,
Jeff Nirschl
Emails
****@stanford.edu
(Confirmed)
,
****@gmail.com
(Confirmed)
,
****@proton.me
(Confirmed)
,
****@wisc.edu
(Confirmed)
Personal Links
Homepage
Google Scholar
DBLP
ORCID
LinkedIn
Semantic Scholar
Career & Education History
Assistant Professor
Pathology,
University of Wisconsin - Madison
(wisc.edu)
2025
–
Present
Postdoc
Pathology,
Stanford University
(stanford.edu)
2020
–
2025
Medical student
Medicine,
University of Pennsylvania Perelman School of Medicine
(pennmedicine.upenn.edu)
2011
–
2019
PhD student
Neuroscience,
University of Pennsylvania
(upenn.edu)
2013
–
2017
Undergrad student
Biology,
University of Iowa
(uiowa.edu)
2008
–
2011
Advisors, Relations & Conflicts
Coauthor
Emma Lundberg
2025
–
Present
Postdoc Advisor
Serena Yeung
2021
–
Present
Coauthor
Anant Madabhushi
2015
–
2019
Coauthor
Michael Feldman
2015
–
2019
Coauthor
Andrew janowczyk
2015
–
2019
PhD Advisor
Erika Holzbaur
2013
–
2017
Expertise
domain adaptation
,
dataset shift
,
model generalization in medical imaging
,
federated learning for healthcare AI
2024
–
Present
self-supervised learning
,
representation learning
,
foundation models for vision
,
multimodal learning (image-text)
,
weakly supervised learning
2022
–
Present
computational pathology
,
digital pathology
,
whole-slide image analysis
,
deep learning for medical imaging
,
computer vision in histopathology
2015
–
Present
Alzheimer’s disease pathology
,
Lewy body disease
,
neurodegeneration imaging biomarkers
,
AI for neuropathology
2013
–
Present
Publications
MicroVQA: A Multimodal Reasoning Benchmark for Microscopy-Based Scientific Research
James Burgess
,
Laura Bravo-Sánchez
,
Jeffrey J Nirschl
,
Alejandro Lozano
,
Sanket Rajan Gupte
,
Jesus G. Galaz-Montoya
,
Yuhui Zhang
,
Yuchang Su
,
Disha Bhowmik
,
Zachary Coman
,
Sarina M. Hasan
,
Alexandra Johannesson
,
William D. Leineweber
,
Malvika G Nair
,
Ridhi Yarlagadda
,
Connor Zuraski
,
Wah Chiu
,
Sarah Cohen
,
Jan N. Hansen
,
Manuel D Leonetti
et al. (3 additional authors not shown)
Proceedings of the Computer Vision and Pattern Recognition Conference
Readers:
Everyone
Can Large Language Models Match the Conclusions of Systematic Reviews?
Christopher Polzak
,
Alejandro Lozano
,
Min Woo Sun
,
James Burgess
,
Yuhui Zhang
,
Kevin Wu
,
Chia-Chun Chiang
,
Jeffrey J Nirschl
,
Serena Yeung-Levy
ICLR 2026 Poster
Readers:
Everyone
A Large-Scale Vision-Language Dataset Derived from Open Scientific Literature to Advance Biomedical Generalist AI
Alejandro Lozano
,
Min Woo Sun
,
James Burgess
,
Jeffrey J. Nirschl
,
Christopher Polzak
,
Yuhui Zhang
,
Liangyu Chen
,
Jeffrey Gu
,
Ivan Lopez
,
Josiah Aklilu
,
Anita Rau
,
Austin Wolfgang Katzer
,
Collin Chiu
,
Orr Zohar
,
Xiaohan Wang
,
Alfred Seunghoon Song
,
Chia-Chun Chiang
,
Robert Tibshirani
,
Serena Yeung-Levy
CoRR 2025
Readers:
Everyone
CellFlow: Simulating Cellular Morphology Changes via Flow Matching
Yuhui Zhang
,
Yuchang Su
,
Chenyu Wang
,
Tianhong Li
,
Zoe Wefers
,
Jeffrey J. Nirschl
,
James Burgess
,
Daisy Ding
,
Alejandro Lozano
,
Emma Lundberg
,
Serena Yeung-Levy
CoRR 2025
Readers:
Everyone
CellFlux: Simulating Cellular Morphology Changes via Flow Matching
Yuhui Zhang
,
Yuchang Su
,
Chenyu Wang
,
Tianhong Li
,
Zoe Wefers
,
Jeffrey J Nirschl
,
James Burgess
,
Daisy Ding
,
Alejandro Lozano
,
Emma Lundberg
,
Serena Yeung-Levy
ICML 2025 poster
Readers:
Everyone
BIOMEDICA: An Open Biomedical Image-Caption Archive, Dataset, and Vision-Language Models Derived from Scientific Literature
Alejandro Lozano
,
Min Woo Sun
,
James Burgess
,
Liangyu Chen
,
Jeffrey J. Nirschl
,
Jeffrey Gu
,
Ivan Lopez
,
Josiah Aklilu
,
Anita Rau
,
Austin Wolfgang Katzer
,
Yuhui Zhang
,
Collin Chiu
,
Xiaohan Wang
,
Alfred Seunghoon Song
,
Robert Tibshirani
,
Serena Yeung-Levy
CVPR 2025
Readers:
Everyone
Micro-Bench: A Microscopy Benchmark for Vision-Language Understanding
Alejandro Lozano
,
Jeffrey J Nirschl
,
James Burgess
,
Sanket Rajan Gupte
,
Yuhui Zhang
,
Alyssa Unell
,
Serena Yeung-Levy
NeurIPS 2024 Track Datasets and Benchmarks Poster
Readers:
Everyone
Revisiting Active Learning in the Era of Vision Foundation Models
Sanket Rajan Gupte
,
Josiah Aklilu
,
Jeffrey J Nirschl
,
Serena Yeung-Levy
Accepted by TMLR
Readers:
Everyone
Micro-Bench: A Microscopy Benchmark for Vision-Language Understanding
Alejandro Lozano
,
Jeffrey J. Nirschl
,
James Burgess
,
Sanket Rajan Gupte
,
Yuhui Zhang
,
Alyssa Unell
,
Serena Yeung
NeurIPS 2024
Readers:
Everyone
Revisiting Active Learning in the Era of Vision Foundation Models
Sanket Rajan Gupte
,
Josiah Aklilu
,
Jeffrey J. Nirschl
,
Serena Yeung-Levy
Trans. Mach. Learn. Res. 2024
Readers:
Everyone
View all 21 publications
Co-Authors
Alejandro Lozano
Alexandra Johannesson
Alfred Seunghoon Song
Alyssa Unell
Anant Madabhushi
Andre Esteva
Andrew Janowczyk
Andrew S Moore
Anita Rau
Austin Wolfgang Katzer
Chad Liu
Chenyu Wang
Chia-Chun Chiang
Christopher Polzak
Collin Chiu
Connor Zuraski
Daisy Ding
Disha Bhowmik
Douwe van der Wal
Eliot G. Peyster
Emma Lundberg
Eric Wait
Felix Y. Feng
Iny Jhun
Israa Laklouk
View all 64 co-authors