Maude M. David

Associate Professor, Microbiology, Oregon State University

Joined

May 2026

Names

Maude M. David (Preferred)

Maude David

Emails

****@oregonstate.edu (Confirmed)

Personal Links

Homepage

Google Scholar

ORCID

Career & Education History

Associate Professor

Microbiology, Oregon State University (oregonstate.edu)

2023 – Present

Assistant Professor

Microbiology, Oregon State University (oregonstate.edu)

2018 – 2023

Researcher

Pediatrics , Stanford University (stanford.edu)

2014 – 2016

Researcher

Earth Science Division, Lawrence Berkeley National Lab (lbl.gov)

2010 – 2013

Advisors, Relations & Conflicts

Coauthor

Jacob H Wynne

2023 – Present

PhD Advisee

Nima Azbijari

2021 – Present

Coworker

Xioali Fern

2020 – Present

Coworker

Andrew R Thurber

2018 – Present

Expertise

Computational Biology

2009 – Present

Microbial ecology

2006 – Present

Publications

Learning a deep language model for microbiomes: The power of large scale unlabeled microbiome data
Maude M. David, Christine Tataru, Xiaoli Fern, Quintin Pope
- OpenReview Archive Direct Upload
- Readers: Everyone
Multi-omic analysis along the gut-brain axis points to a functional architecture of autism
James T. Morton, Dong-Min Jin, Robert H. Mills, Yan Shao, Gibraan Rahman, Daniel McDonald, Kirsten Berding, Brittany D. Needham, María Fernanda Zurita, Maude David, Olga V. Averina, Alexey S. Kovtun, Antonio Noto, Michele Mussap, Mingbang Wang, Daniel N. Frank, Ellen Li, Wenhao Zhou, Vassilios Fanos, Valery N. Danilenko et al. (12 additional authors not shown)
- Crossref
- Readers: Everyone
Revealing General Patterns of Microbiomes That Transcend Systems: Potential and Challenges of Deep Transfer Learning
Maude M. David, Christine Tataru, Quintin Pope, Lydia J. Baker, Mary K. English, Hannah E. Epstein, Austin Hammer, Michael Kent, Jr Michael J. Sieler, Ryan S. Mueller, Thomas J. Sharpton, Fiona Tomas, Rebecca Vega Thurber, Xiaoli Z. Fern, Linda Kinkel
- mSystems
- Readers: Everyone
Children with Autism and Their Typically Developing Siblings Differ in Amplicon Sequence Variants and Predicted Functions of Stool-Associated Microbes
Maude M. David, Christine Tataru, Jena Daniels, Jessey Schwartz, Jessica Keating, Jarrad Hampton-Marcell, Neil Gottel, Jack A. Gilbert, Dennis P. Wall, Emily K. Cope
- mSystems
- Readers: Everyone
Decoding the language of microbiomes using word-embedding techniques, and applications in inflammatory bowel disease
Christine A. Tataru, Jacopo Grilli, Maude M. David
- PLOS Computational Biology
- Readers: Everyone
Decoding the Language of Microbiomes: Leveraging Patterns in 16S Public Data using Word-Embedding Techniques and Applications in Inflammatory Bowel Disease
Christine A. Tataru, Maude M. David
- Crossref
- Readers: Everyone

Co-Authors

View all 54 co-authors

Maude M. David

Names

Emails

Personal Links

Career & Education History

Advisors, Relations & Conflicts

Expertise

Publications

Learning a deep language model for microbiomes: The power of large scale unlabeled microbiome data

Multi-omic analysis along the gut-brain axis points to a functional architecture of autism

Revealing General Patterns of Microbiomes That Transcend Systems: Potential and Challenges of Deep Transfer Learning

Children with Autism and Their Typically Developing Siblings Differ in Amplicon Sequence Variants and Predicted Functions of Stool-Associated Microbes

Decoding the language of microbiomes using word-embedding techniques, and applications in inflammatory bowel disease

Decoding the Language of Microbiomes: Leveraging Patterns in 16S Public Data using Word-Embedding Techniques and Applications in Inflammatory Bowel Disease

Co-Authors