Ruheng Wang

PhD student, biomedical engineering department, University of Texas Southwestern Medical Center

Joined

October 2024

Names

Ruheng Wang (Preferred)

ruheng wang

Wang Ruheng

Emails

****@utsouthwestern.edu (Confirmed)

Personal Links

Career & Education History

PhD student

biomedical engineering department, University of Texas Southwestern Medical Center (utsouthwestern.edu)

2024 – 2027

MS student

school of software, Shandong University (sdu.edu.cn)

2020 – 2023

Advisors, Relations & Conflicts

No relations added

Expertise

No areas of expertise listed

Publications

DiffuScope: A diffusion-regularized autoencoder for spatial transcriptomic clustering
Hua Shi, Ding Yi, Yang Cui, Ruheng Wang, Yan Li, Chunyan Ao, Ruihua Guo, Weihang Zhang, Tao Peng, Yuying Le, Yaxuan Cui, Leyi Wei
- Comput. Biol. Chem. 2026
- Readers: Everyone
Scaling Medical Reasoning Verification via Tool-Integrated Reinforcement Learning
Hang Zhang, Ruheng Wang, Yuelyu Ji, Min Gu Kwak, Xizhi Wu, Chenyu Li, Li Zhang, Wenqi Shi, Yifan Peng, Yanshan Wang
- CoRR 2026
- Readers: Everyone
A Multi-Objective Comprehensive Framework for Predicting Protein-Peptide Interactions and Binding Residues
Ruheng Wang, Xuetong Yang, Chao Pang, Leyi Wei
- IEEE J. Biomed. Health Informatics 2025
- Readers: Everyone
PepThink-R1: LLM for Interpretable Cyclic Peptide Optimization with CoT SFT and Reinforcement Learning
Ruheng Wang, Hang Zhang, Trieu Nguyen, Shasha Feng, Hao-Wei Pang, Xiang Yu, Li Xiao, Peter Zhiping Zhang
- NeurIPS2025-AI4Science Spotlight
- Readers: Everyone
PepThink-R1: LLM for Interpretable Cyclic Peptide Optimization with CoT SFT and Reinforcement Learning
Ruheng Wang, Hang Zhang, Trieu Nguyen, Shasha Feng, Hao-Wei Pang, Xiang Yu, Li Xiao, Peter Zhiping Zhang
- CoRR 2025
- Readers: Everyone
Multiview Deep Learning-Based Molecule Design and Structural Optimization Accelerates Inhibitor Discover
Chao Pang, Yu Wang, Yi Jiang, Ruheng Wang, Xiaojun Yao, Quan Zou, Xiangxiang Zeng, Ran Su, Leyi Wei
- IEEE Trans. Neural Networks Learn. Syst. 2025
- Readers: Everyone
DeepBIO: an automated and interpretable deep-learning platform for high-throughput biological sequence prediction, functional annotation and visualization analysis
Ruheng Wang, Yi Jiang, Junru Jin, Chenglin Yin, Haoqing Yu, Fengsheng Wang, Jiuxin Feng, Ran Su, Kenta Nakai, Quan Zou, Leyi Wei
- Nucleic Acids Research
- Readers: Everyone
CACPP: A Contrastive Learning-Based Siamese Network to Identify Anticancer Peptides Based on Sequence Only
Xuetong Yang, Junru Jin, Ruheng Wang, Zhongshen Li, Yu Wang, Leyi Wei
- Journal of Chemical Information and Modeling
- Readers: Everyone
AttenSyn: An Attention-Based Deep Graph Neural Network for Anticancer Synergistic Drug Combination Prediction
Tianshuo Wang, Ruheng Wang, Leyi Wei
- Journal of Chemical Information and Modeling
- Readers: Everyone
Multi-CGAN: Deep Generative Model-Based Multiproperty Antimicrobial Peptide Design
Haoqing Yu, Ruheng Wang, Jianbo Qiao, Leyi Wei
- Journal of Chemical Information and Modeling
- Readers: Everyone

View all 28 publications

Co-Authors

View all 64 co-authors