Jonathan H Warrell

Researcher, NEC

Postdoc, Yale University

Joined

September 2020

Names

Jonathan H Warrell (Preferred)

Jonathan Warrell

Emails

****@gmail.com (Confirmed)

****@yale.edu (Confirmed)

Personal Links

Google Scholar

DBLP

Career & Education History

Researcher

NEC (nec.com)

2023 – Present

Postdoc

Yale University (yale.edu)

2016 – Present

Advisors, Relations & Conflicts

Postdoc Advisor

Mark Gerstein

2016 – 2023

Expertise

Computational Biology

2016 – 2023

Machine Learning

2010 – 2023

Computer Vision

2007 – 2023

Publications

Guidance of Diffusion-Based Conditional Generative Models for Antibody Design
Francesco Alesiani, Jonathan H Warrell, Henrik Christiansen, Matheus Ferraz
- EurIPS 2025 Workshop PriGM
- Readers: Everyone
Discrete-Continuous Variational Optimization with Local Gradients
Jonathan H Warrell, Francesco Alesiani, Cameron Smith, Anja Mösch, Martin Renqiang Min
- NeurIPS 2024 Workshop
- Readers: Everyone
A Meta-Probabilistic-Programming Language for Bisimulation of Probabilistic and Non-Well-Founded Type Systems
Jonathan Warrell, Alexey Potapov, Adam Vandervorst, Ben Goertzel
- Published: 01 Jan 2022, Last Modified: 13 May 2023
- AGI 2022
- Readers: Everyone
Higher-Order Generalization Bounds: Learning Deep Probabilistic Programs via PAC-Bayes Objectives
Jonathan Warrell, Mark Gerstein
- Published: 01 Jan 2022, Last Modified: 13 May 2023
- CoRR 2022
- Readers: Everyone
A meta-probabilistic-programming language for bisimulation of probabilistic and non-well-founded type systems
Jonathan Warrell, Alexey Potapov, Adam Vandervorst, Ben Goertzel
- Published: 01 Jan 2022, Last Modified: 13 May 2023
- CoRR 2022
- Readers: Everyone
Hybrid Quantum-Classical Stochastic Networks with Boltzmann Layers
Jonathan H Warrell, Prashant Emani, Mark Gerstein
- 28 Sept 2020 (modified: 05 May 2023)
- ICLR 2021 Conference Withdrawn Submission
- Readers: Everyone
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
Esther Rheinbay, Morten Muhlig Nielsen, Federico Abascal, Jeremiah Wala, Ofer Shapira, Grace Tiao, Henrik Hornshøj, Julian M. Hess, Randi Istrup Juul, Ziao Lin, Lars Feuerbach, Radhakrishnan Sabarinathan, Tobias Madsen, Jaegil Kim, Loris Mularoni, Shimin Shuai, Andrés Lanzós, Carl Herrmann, Yosef E. Maruvka, Ciyue Shen et al. (169 additional authors not shown)
- 2020 (modified: 03 Nov 2022)
- Nat. 2020
- Readers: Everyone
Rank Projection Trees for Multilevel Neural Network Interpretation
Jonathan Warrell, Hussein Mohsen, Mark Gerstein
- Published: 01 Jan 2018, Last Modified: 13 May 2023
- CoRR 2018
- Readers: Everyone
Dense Semantic Image Segmentation with Objects and Attributes
Shuai Zheng, Ming-Ming Cheng, Jonathan Warrell, Paul Sturgess, Vibhav Vineet, Carsten Rother, Philip H. S. Torr
- 2014 (modified: 10 Nov 2022)
- CVPR 2014
- Readers: Everyone
A Tiered Move-making Algorithm for General Non-submodular Pairwise Energies
Vibhav Vineet, Jonathan Warrell, Philip H. S. Torr
- Published: 01 Jan 2014, Last Modified: 13 May 2023
- CoRR 2014
- Readers: Everyone

View all 35 publications

Co-Authors

View all 230 co-authors