ICLR 2025 Workshop LMRL Submissions

Representation Learning for Distributional Perturbation Extrapolation
Julius von Kügelgen, Xinwei Shen, Jakob Ketterer, Nicolai Meinshausen, Jonas Peters
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Latent Representation Encoding and Multimodal Biomarkers for Post-Stroke Speech Assessment
Giulia Sanguedolce, Dragos-Cristian Gruia, Patrick Naylor, Fatemeh Geranmayeh
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
END-TO-END INTERPRETABLE GRAPH LEARNING FOR PATIENT CLASSIFICATION
Maria Boulougouri, Vamsi Nallapareddy, Pierre Vandergheynst
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
RxRx3-core: Benchmarking drug-target interactions in high-content microscopy
Oren Kraus, Federico Comitani, Kian Kenyon-Dean, John Urbanik, Lakshmanan Arumugam, Saber Saberian, Cas Wognum, Safiye Celik, Imran S Haque
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Integrating Protein Language Model and Active Learning for Few-Shot Viral Variant Detection
Marian Huot, Dianzhuo Wang, Jiacheng Liu, Eugene Shakhnovich
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Protriever: End-to-End Differentiable Protein Homology Search for Fitness Prediction
Ruben Weitzman, Peter Mørch Groth, Aoi Otani, Debora Susan Marks, Yarin Gal, Pascal Notin
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Bridging Sequence and Kinetics: Utilizing Multi-scale Representations for Genome-Scale Metabolic Models
Rana Ahmed Barghout, Lya Chinas Serrano, Zhiqing Xu, Benjamin Manuel Sanchez, Radhakrishnan Mahadevan
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Bridging scales between chemical space and behavioral phenotype
Adrien Jouary, J. Miguel Mata, Dean Rance, Gonzalo G. de Polavieja, Christian K. Machens, Michael Orger
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Task-Driven Graph Neural Network Pre-Training: A Path to Robust EEG Representations in Motor Planning
Federico Nardi, Jinpei Han, Aldo A. Faisal, Shlomi Haar
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Leveraging Transfer Learning and Multimodal Foundation Models for Antibiotic Discovery Against Data-Scarce Escherichia coli Strains
Sugitha Janarthanan, Gen Zhou, Yan Yi Li, Zihao Jing, Pingzhao Hu
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Learning Representations of Instruments for Partial Identification of Treatment Effects
Jonas Schweisthal, Dennis Frauen, Maresa Schröder, Konstantin Hess, Niki Kilbertus, Stefan Feuerriegel
- Published: 06 Mar 2025, Last Modified: 18 Apr 2025
- ICLR 2025 Workshop LMRL Withdrawn Submission
- Readers: Everyone
Transformers trained on proteins can learn to attend to Euclidean distance
Isaac Ellmen, Constantin Schneider, Matthew I. J. Raybould, Charlotte Deane
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Character-level Tokenizations as Powerful Inductive Biases for RNA Foundational Models
Adrian Morales-Pastor, Raquel Vázquez-Reza, Miłosz Wieczór, Clàudia Valverde, Manel Gil-Sorribes, Bertran Miquel-Oliver, Alvaro Ciudad Serrano, Alexis Molina
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Hierarchical Mixture of Topological Experts for Molecular Property Prediction
Kiwoong Yoo, Jaewoo Kang
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
PETIMOT: A Novel Framework for Inferring Protein Motions from Sparse Data Using SE(3)-Equivariant Graph Neural Networks
Valentin Lombard, Sergei Grudinin, Elodie Laine
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Tensor-DTI: Enhancing Biomolecular Interaction Prediction with Contrastive Embedding Learning
Manel Gil-Sorribes, Alvaro Ciudad Serrano, Alexis Molina
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Learning a mechanical growth model of flower morphogenesis
Argyris Zardilis, Alexandra Budnikova, Henrik Jönsson
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
On multi-scale Graph Representation Learning
Christian Koke, Dominik Schnaus, Yuesong Shen, Abhishek Saroha, Marvin Eisenberger, Bastian Rieck, Michael M. Bronstein, Daniel Cremers
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Multi-Modal Disentanglement of Spatial Transcriptomics and Histopathology Imaging
Hassaan Maan, Zongliang Ji, Elliot Sicheri, Tiak Ju Tan, Alina Selega, Ricardo Gonzalez, Rahul Krishnan, BO WANG, Kieran R. Campbell
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Towards Representation Learning for Phenotyping beyond Animal Pose Estimation
Takatomi Kubo, Nina Nakajima, Nanako Miyai, Midori Osaki, Suzuka Higashitsutsumi
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
SOAPI: Siamese-guided generation of Off-Target-Avoiding Protein Interactions
Sophia Vincoff, Oscar Davis, Alexander Tong, Joey Bose, Pranam Chatterjee
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Benchmarking and optimizing organism wide single-cell RNA alignment methods
Juan Javier Díaz-Mejía, Elias Williams, Octavian Focsa, Dylan Mendonca, Swechha Singh, Brendan Innes, Samuel Cooper
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Guided Generation of B-cell Receptors with Conditional Walk-Jump Sampling
Taylor Joren, Sarah A Robinson, Homa MohammadiPeyhani, Sai Pooja Mahajan, Edith Lee, Stephen Lillington, Qixin Bei, Saeed Saremi, Jae Hyeon Lee, Richard Bonneau, Isidro Hotzel, Vladimir Gligorijevic, Simon Kelow, Nathan C. Frey
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
To Bin or not to Bin: Alternative Representations of Mass Spectra
Niek F. de Jonge, Justin J.J. van der Hooft, Daniel Probst
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone
Generalized Representation Learning for Multimodal Histology Imaging Data Through Vision-Language Modeling
Jacob S Leiby, Alexandro E Trevino, Aaron T Mayer, Zhenqin Wu, Dokyoon Kim, Zhi Huang
- Published: 06 Mar 2025, Last Modified: 21 Jul 2025
- ICLR 2025 Workshop LMRL
- Readers: Everyone